NONHSAT002534

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT002534

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1633 nt

Genomic location

chr1+:39337899..39341892

Exon number

2

Exons

39337899..39339251,39341613..39341892

Genome context

Sequence
000001 CATTCTACAC CCTTGAATAT CCCAGTGAGT TGAGTGACAC ATAGCAGGCA TTCAAATTAG TGCTAAGCCA ATAAAGTAAA 000080
000081 CTGTACCCTA CCCCTTGAAA TCCTCCTGTT TCCAACACTT TACTCATCTA CTTAACTTAG ATCTTGAAGC CACGAATGAA 000160
000161 GAGATACAGC GTTAACAGTA AGCTTTCATT TTAAAAAGTG AAAACAATGT AACCACCTTG ATATGCCCTC GAGCTCTTTA 000240
000241 AGCTGTAATT CTACTTTATG AAATATACAC AAAATAAGAA TTGACACAGA CAGACTAAGG AATGGGGGCT GAAAAGCCAC 000320
000321 AGCCAAATTC GCTATGAATC TCCTACTTTG GGGATTAGGC TCACTCAGCT ACTTCATAGC CCACTTGGAA ATTCGGTCAT 000400
000401 TTTTCCAGTT GCTCTTTGTT GGAGGGAAAC TTTCTTAACA AGATTCTGAG GACTCCATAA AAACCGTAAG GTGGGAGGAA 000480
000481 TTGGGATCTG AAGGTCCTTG GCAAACATGT CCACTGCGGC TGCTGGAGGC AAAGCAACGG AAGTTGAAGA GACTTTGCAA 000560
000561 CAGCTGCAAG AGTTTCACTC CCGGTGCGGA GAAGGGTAGC GGAGCTAGGC TACCCCACCC GGGCGGCGTC CAGCAGCCAG 000640
000641 GTCCCTGCTG AACCCCGAGG CCCACCTCGC TGGACCCCGG ACGGGCCCCA TCTGTTTCCC CTCCTTCCCC ACGCTACGGC 000720
000721 CCGCTGGGGA ACGGGGCAGC GCCGGGGAGC ACGACGAGGG CACGAGGTAC CCTCTCCTAG CCCAGGCTCA CCCTTGGTCA 000800
000801 GCGTGTCCAG CACCCCCGAC TTCTCCAAGT ACCTCCGGAA CTGCTCACGC TTCGAGTCGG CGGCCTGAAG AGACACCGGG 000880
000881 GGTCAGTGGC CAGAGCCCGG GAGCCGAGCA GGAAGAAGGC GCTGGGAGTC CGGCAACCCC GCCTCCGCCT CACTACCTCG 000960
000961 GGGCCCTCCC GCCCAAACCT GCGCGCGCGA CCCCACTCCC ACCCAGAGCC GACCAGCGGC TTGCTACCGC CCGCATGCCC 001040
001041 CCAGCCACGC CGCGCCCCCC TCACTTTGTA ATGGGCCATA GTGACAGCGG CAGCGGCGTA GCTGGCGCCG GAGACCGCGA 001120
001121 CTGGCGGGTT GGGAGCAGCA CTGCTCATGC GCGGAAGGGG GCGCGCGCCT GCGCACTTGC AAACCACCGG CCGGGATCGC 001200
001201 CGAGGTGTGG CCTGTTTTCA TGGCGACCAG GACGCTCTGC ATCCCCAGTA GCAGGCTGAG CCGAGGGAGG CTGCGTATGC 001280
001281 CCGCCCCTCT GGCTGTCGGA GCCGCACCTC TTCCTCTTCC GGCCCCCGTA GCAATTAGGT TTCTTTGCAG GAGATGAAGC 001360
001361 CAGACTGCTC ATCATTCCAG ACATCTTCAG CTGCTACACC CAGAACAAGC ATTCGAAATA TGAACAGGAT GGTGAGCCAG 001440
001441 ATCTTTCCAA TCATGGTGGA GTGGATGTGA ACTTCCTCCA GAGTATCTCC AAGGAGATTC CAGTCCCCCA TGTTTATTTA 001520
001521 GTCAGCCATC TTAGCTCTGA TCCACATCAA ATAAGAGGCA GATAAATTCT TCCATTCTGA AGGGAGCACT ATTTCTTAAA 001600
001601 GCAAACCTAT GGTGAAAATA TAACAATATG TCA
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Predicted Small Protein

Name NONHSAT002534_smProtein_1034:1258
Length 75
Molecular weight 7587.4268
Aromaticity 0.0540540540541
Instability index 52.7837837838
Isoelectric point 11.7040405273
Runs 14
Runs residual 0.046539222149
Runs probability 0.0466601054836
Amino acid sequence MPPATPRPPHFVMGHSDSGSGVAGAGDRDWRVGSSTAHARKGARACALANHRPGSPRCGL
FSWRPGRSASPVAG
Secondary structure LLLLLLLLLLEEEELLLLLLLEELLLLLLLEEELLHHHHHHLLLEEHHHLLLLLLLLLLL
EELLLLLLLLLLLL
PRMN -
PiMo -