NONHSAT002568
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT002568 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(AS) |
Length |
599 nt |
Genomic location |
chr1-:39989465..39991002 |
Exon number |
2 |
Exons |
39989465..39989568,39990508..39991002 |
Genome context |
|
Sequence |
000001 ACCTCATGGC CAGGTTTGTG CCCTTAGTGA GGTCCCCAAG GGGGAACCTG GAAGGACCAC TGTCTTCTTA TAGCCCTTCA 000080
000081 GACCCCCCCA GAGGCTCTGC CTCCCCACAC CCTGGCCTCC CTCCCCAGGC TCTGGGAGGC CAGGCCTCGC CCCCTCTCCT 000160 000161 GTGCTGCTCC TTCTCCCAGA GGACTGCATC CGCCCTCAGC ACTTCAAGGC CCTGCATGTG CCCGCACCTC TCCACTCCCC 000240 000241 TGGCTcagct tggacctctc ttctgaactc cagacttgcg gatcctgctc cccttcccac ttctgcactt gggggtctaa 000320 000321 tgaggcctcA GTGGAACATA GAATTCCTCC CGCCCTGACA TCATAGCTCC CGCCTGGGAG GCCTCCTGGA TGACTCCTTT 000400 000401 CGCCTCCTCC CTTCCCTGAG AGCAGCCCCT GGCTCAACCT ccacctccgt gctgcctcgg accacctgcc cagtcgagct 000480 000481 gccatcacct gccagggtga gccactgcgc ctgatcAAGG CATCACCGTT GAACCTCCTA AGAGGAAAAC ATAAGGCTGT 000560 000561 GCAATACCAG GAACTGGGAT TCTAGGTAAA AACTTCTAG |
Predicted Small Protein
Name | NONHSAT002568_smProtein_5:265 |
Length | 87 |
Molecular weight | 8909.1818 |
Aromaticity | 0.046511627907 |
Instability index | 63.038372093 |
Isoelectric point | 9.36883544922 |
Runs | 11 |
Runs residual | 0.0117146824019 |
Runs probability | 0.0288898524193 |
Amino acid sequence | MARFVPLVRSPRGNLEGPLSSYSPSDPPRGSASPHPGLPPQALGGQASPPLLCCSFSQRT ASALSTSRPCMCPHLSTPLAQLGPLF |
Secondary structure | LLEEEELEELLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLEEEEELLLLH HHHLLLLLLLLLLLLLLLHHHLLLLL |
PRMN | - |
PiMo | - |