NONHSAT002711

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT002711

Source

NONCODE4.0

Same with

,

Classification

sense

Length

1476 nt

Genomic location

chr1-:41972263..41974050

Exon number

2

Exons

41972263..41972274,41972587..41974050

Genome context

Sequence
000001 CAGAAAGTGA CTCCTCCAAG TCCCAGGAGG CCAGGGCTTT TCTCATCCTT GCCTTTCAGC CCTAACCCAT GGGACTGCCC 000080
000081 ACGGATTGGA GACTTCAAGG GCTGAGGTCT GGGAGCTGCA TAAAGGGCAT TGCTTCAGCC CAGGTTAGAA ATCTGCCTGG 000160
000161 GCAAGCTCTT CCTGCCCCAG ACCTACAAAG CAGCAGACCG GGGGCTCTGG TGGACTAGCC CCTGACATTG GTGGGGGGCC 000240
000241 CCACACCACT CCACCCCACC CTGCCTTCCA GCTCTCCTGG GCATTTTTCT CCCTGTACTC AAACAGCCTA CCCACCCAAG 000320
000321 GTTTCCTCCC TGGGCAGCCT AGCAATGAAC AGTGCAGCCG GCAGGGCAGA GGCCCGGCAG TCACCGGGCC CGTCAGGCTC 000400
000401 AGGCAGAGAA GCCACAGGGG CCAGGAGTCA CTGGAGACTA TTTCTAAATG ATGGGGGTAA ATGCACAAAT AGAATCTCAC 000480
000481 CAAAGGGCTG CCTCCACATT GATGCCGTGC CCAGAGGGAC AGAACCAATG CCACCAGCCT GGGTATATGT CACTGGGCAC 000560
000561 AGCTCTAACC CCCTCCTCCG GACTCTAGTC CCGCTCCTCT GCGCACAGAG CCCCCAGCCC ACAGGTACAC CTTCATGATT 000640
000641 TGGAGAAAGA CGCTCGCCCC ATGCACGCCC TCCTCTGGGC CTTCTGCCCT GCTCCCAGTC ACTTCCAAGC TTCCTGTTTG 000720
000721 CCTGTGATGT TATTGTGCCT GTTGAGGGAA GCAGCAGAGG AGGCAGTGGC TGACTTGGCA CAGATGCCTG CTACGTGCTC 000800
000801 TGTTGAAATG CGCGGGGTGG CCATTCCTCG GTACAGACTA GTCCTGGTCC TTGGGTGTGG GCAGTGGGGG AGGAACCAAC 000880
000881 TGGTCGAGGT TTCAGAGCCA AACCTTGCCT TTGGTTGGTG AGTCCTTGCC CCCCAGGCCT GCGCTCCACG ATGCCTTTCA 000960
000961 CCCTTGGCAA TCTCAGGGCC ATCCTGGGTA GTAACCCCAC TCCTCTCTGC TCCCGCCCGC ACCTGTGGCT CTCACTCTGG 001040
001041 GCTCAACCCC TGCAACCCTC CAGGAGCCCG ACAGCAGCCA GCTGCCTGCA CTGTCGCCTC CGTAAGCTCC AACTTCCAGA 001120
001121 CCCAGAAGTC CCTCTGCTTC CCTCTGTTGG AAAAAGCCTA AAAGAATTAG CTTCCAGATT CCTCTAGCCC CTGCTCCATT 001200
001201 CCCACCCAGT CCTTCTGAAG AGGAATGAGC AATACATCTG AGCTGGATTT CTCTCTAGTC CTTTCTCCAG ACAAATCCTT 001280
001281 CTTAAAGCAA AAGTCCTGGC TGAGCACCTG TCCTTGGGGA CCGATCTGCC GTGTGACCAG GGGAAGAAAG TTCCCGAAAG 001360
001361 CCTGTTCCAC CAATTCTGCT TCTGTGTTGT GAATCCAGTC TGCTTTCCAT TAGAAAACCG CTTCGGCACT TATGGTCACT 001440
001441 TTAATAAATC TAGTATGTAA AAAAAAAAAA AAAAAA
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Predicted Small Protein

Name NONHSAT002711_smProtein_344:637
Length 98
Molecular weight 10187.4138
Aromaticity 0.0412371134021
Instability index 64.4639175258
Isoelectric point 9.87872314453
Runs 15
Runs residual 0.0231004200076
Runs probability 0.0332037920273
Amino acid sequence MNSAAGRAEARQSPGPSGSGREATGARSHWRLFLNDGGKCTNRISPKGCLHIDAVPRGTE
PMPPAWVYVTGHSSNPLLRTLVPLLCAQSPQPTGTPS
Secondary structure LLLHHHHHHLLLLLLLLLLLLLLLLLLLEEEEEELLLLEEELEELLLLEEEELLLLLLLL
LLLLEEEEEELLLLLHHHHHHHHHHLLLLLLLLLLLL
PRMN -
PiMo -