NONHSAT002916

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT002916

Source

NONCODE4.0

Same with

,

Classification

sense

Length

524 nt

Genomic location

chr1+:45480211..45481064

Exon number

2

Exons

45480211..45480678,45481009..45481064

Genome context

Sequence
000001 CCAGGTTGCG GGAGGCAGGC CTGGCACCAG TGCCCATGGT GAGGATTGGG ATGGGTTGAG TGAAGGTGGT CCTGTGGAGC 000080
000081 TTTCAGGCTA AGTCCTGCAT GGACTGGAGT GACCACTGGA GGGCAGCAGA AGTACAGTCA AGAAAGATTA GTGGTTGTAG 000160
000161 CAAGGCCCTC TGTAGCCTGA GATCTGCTTT TTTCTAGATC ATCTTTGCTA AGGATGGGCA TTTTGCCCTG GAGGAGCTGG 000240
000241 CCCAAGCTGG CTATGAGGTG GTTGGGCTTG ACTGGACAGT GGCCCCAAAG AAAGCCCGGT AAGCCATGGA AGGGTGAGGC 000320
000321 CTTGAGGTTG AGGTGGGGGT GTTGGCTGGG GGAGCTGCCA TGTATGCAGT TACCAGAACG TGGCGCTGGC TTTGCTTCCA 000400
000401 GGGAGTGTGT GGGGAAGACG GTGACATTGC AGGGCAACCT GGACCCCTGT GCCTTGTATG CATCTGAGGA GGAGATCGGG 000480
000481 CAGTTGGTGA AGCAGATGCT GGATGACTTT GGACCACATC GCTA
[back to top]

Predicted Small Protein

Name NONHSAT002916_smProtein_359:466
Length 36
Molecular weight 3859.4998
Aromaticity 0.114285714286
Instability index 50.7714285714
Isoelectric point 4.55645751953
Runs 7
Runs residual 0.0188861985472
Runs probability 0.037524919878
Amino acid sequence MYAVTRTWRWLCFQGVCGEDGDIAGQPGPLCLVCI
Secondary structure LEEEELLLHHHHHLLLLLLLLLLLLLLLLEEEEEL
PRMN -
PiMo -