NONHSAT003132

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT003132

Source

NONCODE4.0

Same with

,

Classification

intronic(S)

Length

2275 nt

Genomic location

chr1-:48844751..48847025

Exon number

1

Exons

48844751..48847025

Genome context

Sequence
000001 ATTTTTACCA AGTTTCTGGG TGATTCTTAT GCATCTCTTT TGCCATCTAT CTAAGGATTC ATAACTGAGA GCCACTAGTA 000080
000081 TAGACTATGA ATATAACACT TATATAGATA GGGCTCTTCC TGTATAGCAG GAGTCCCCAA CCCAGGCCAC AGACGAGTAG 000160
000161 TTGTCTGTGG CCTGTTAGGA ACTGGGCCAC ACCACAGGAG GTGAGTGGCA GGTGAGTGAG CATTATGGCC TGAGCTCCAC 000240
000241 CTCCTGTCAG ATCGGTGGCA GCATTGGATT CTCATAGGAG CACGAACCCT ACTGTGCTGT GCATATGAGG GATCTAGGTT 000320
000321 GTGTGCTCCT TGTGAGAATC TAACTAATGC CTGATGATCT GAGGTGGAAC AGTTTCATTC TGAAACCAGA CATCCTCCCC 000400
000401 GCCCCCCACC AGTTCGTGGA AAAATTGTCT TCCACAAAAC TGGTTCCTGG TACTGAAAAG GTTGGGGACT GCTGCTGTAT 000480
000481 AGTGTTTATA TATAGAGTTG TTCCTTTTTT AAGGCCCTCA CTAGAGGAGA GGAGGCCTGG AATAATTAAC TTAGTCCAGT 000560
000561 CTCATCCTAA CATTTAAAAT TTATGCAAAC ACATACACAT GCACATTGGT ATTTGTTCTA CACACAAATG TACACAGTAT 000640
000641 GGCAAGGACC TATTGATCTT GCTTATTGAT AATAATTGGT AGTACCTAGC ATATTATCTG ACATATAGTA GGAATTCCTA 000720
000721 ACATATGCAT ATTATGTGAG TGGACTATTA AGGGAAAACA AGTAAACCAA ATCTATACAA ATATAGAATG AAGAGCAAGT 000800
000801 ACTAATCTTT ATCCTAAGGT GGCTATAATC CTGCTATAAG TTGGCTGGTC CATTTAAAGT CAGGTATTAA GAGCCCTCTT 000880
000881 TTCCAAATGA ATTCCACCAA AAACTGCATT TCAACCCCTT TAATTCCTTT CCACTCTCAT CGCTGGATTC CTTAATATCA 000960
000961 GGGCTTCCCT TAGGGGATAG TAGGTGGTAA GTTCACAGGA TTATTTTTGT ATTCAAGAGG TAGATTGTCA TATAAATATA 001040
001041 TCTGCAGCAT TGAACATGAA AATAAAAAAG GATTATTTTC ATGTAGGTAC ATAGTAGTTA GTTAATAAAT ATTCAAGTAA 001120
001121 TAGAACACTT TAGGACTTCT ATATGGAAAA GAGCCATGAA GCCAGGAGTG CTCACAGAAC ATTTTCTAGA AAAGTAGGAC 001200
001201 CTTGCATGAG TTCTTTGAAT GAATGTACTT TGCATAGGCA AGAGAATTCT TTCCCGAGAT TCTCACTTTT TCTTTTTTCT 001280
001281 CCAGCTTTAT TAAGGTATAA TTGACAAAAG TTTTATGTAC TTATGGTACA ACATGATGTT TTCATATATG TATATGTTGT 001360
001361 GGAATGATTA AATTAAGCTA CTTAATGTAT CTATTACTTC ACATACTTAT TTGTTGTGGT GAGTTTTATT TTCACAATTT 001440
001441 TTTAAGGCTA TCATACACGT AAAGCATGTG ATACTGCAAT TTCATTTATC ATGGTGAGTT TTATTTCCAT TGTATTTTTA 001520
001521 AAGGCTATCA TGCATGTAAA GCGTATGATA CTGGATTTTC ATTTATTATG TCACCATGAT AAATAAATAA AGAAGAGAGG 001600
001601 GTGGCTTTAA GGAAAAGAGC ATAAGATATG TGCAAATACT GCAAAGATTA TGAGGGTGCT CTGTGAATGA CTGAAGTTTG 001680
001681 GAAGTGCTAC CATGTAAGGT ATTACTGAAT GTAACAACTG ATTTTCTCTG CTAAGACAAA TCTGTCTTAG CAATTTTCAA 001760
001761 GTATATGATA TATCATTAGT TATAGTCATC ATGCTGTAAA ATAGATCTCC AGAATTTTTT CATCCTGTCT ACTTGAAACT 001840
001841 TTGTACCCTT TGACCAACAT CTCTGCATTC TGCCCACCAT ACCCCAATGT CCCCCTGGCA ACCACCATTC TGTTTTCTGC 001920
001921 TTCTATGAGT TTGACTTTTT TAGATTCTAC ATGTGATATT GTTTGGCTCT GTGTCCCCAC CCAAATCTCA TCTCGAATTG 002000
002001 TAATCCCCAC GTGTCAAGAG ATGGACAATT CCCACCTGTC GAGAGAGAGA GGTGACTGGA TCATGAAGGC AATTTCCCCC 002080
002081 TTGCTGTTTC ATGATAGTGA GTTCTCACGA GTTCTGATGG TTTGATAAGC AGTTTTCCCC ACTGTTGCTT GCTCTCTCTT 002160
002161 GCCTGCCACC ATGTAAGATG TGCCTGTTTC TCCTTCTGCC ATGATTGTAA GTTTCCTGAG ACCTCCCCAA CCATGCAGAA 002240
002241 CTGTGAGTCA ATTAAACCTC TTTTCTTTAA AAATT
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Predicted Small Protein

Name NONHSAT003132_smProtein_1142:1303
Length 54
Molecular weight 6216.0384
Aromaticity 0.11320754717
Instability index 73.9679245283
Isoelectric point 9.83404541016
Runs 9
Runs residual 0.00954901058444
Runs probability 0.0276158511453
Amino acid sequence MEKSHEARSAHRTFSRKVGPCMSSLNECTLHRQENSFPRFSLFLFSPALLRYN
Secondary structure LLLLHHHHHHHHHHLLLLLLLLLLLLLLLEELLLLLLLLEEEEEELHHHHLLL
PRMN -
PiMo -