NONHSAT003216
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT003216 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1013 nt |
Genomic location |
chr1-:52281601..52299745 |
Exon number |
8 |
Exons |
52281601..52282061,52283738..52283807,52285472..52285545,52287170..52287227,52289336..52289458,52290959..52291054,52293468..52293541,52299689..52299745 |
Genome context |
|
Sequence |
000001 ACGCACTGTC TTTCAGTTTG ATGTCCAGAG GAAGTACTTC AAGGAAGCTC TTGATAGATG GGCGCAGTTC TTCATCCACC 000080
000081 CACTAATGAT CAGAGATGCA ATTGACCGTG AAGTTGAAGC TGTTGATAGT GAATATCAAC TTGCAAGGCC TTCTGATGCA 000160 000161 AACAGAAAGG AAATGTTGTT TGGAAGCCTT GCTAGACCTG GACATCCTAT GGGAAAATTT TTTTGGGGAA ATGCTGAGAC 000240 000241 GCTCAAGCAT GAGCCAAGAA AGAATAATAT TGATACACAT GCTAGATTGA GAGAATTCTG GATGCGTTAC TACTCTTCTC 000320 000321 ATTACATGAC TTTAGTGGTT CAATCCAAAG AAACACTGGA TACTTTGGAA AAGTGGGTGA CTGAAATCTT CTCTCAGATA 000400 000401 CCAAACAATG GGTTACCCAG ACCAAACTTT GGCCATTTAA CGGATCCATT TGACACACCA GCATTTAACA AACTTTATAG 000480 000481 AGTTGTTCCA ATCAGAAAAA TTCATGCTCT GACCATCACA TGGGCACTTC CTCCTCAACA GCAACATTAC AGGGTGAAGC 000560 000561 CACTTCATTA TATATCCTGG CTGGTTGGAC ATGAAGGCAA AGGCAGCATT CTTTCTTTCC TTAGGAAAAA GCAAGTATTC 000640 000641 AATTAATAAG TATTTTCAGT ATAGCAATCT CTGAAAAATA GTAgacaata agtattatat aatgcattct tttactttag 000720 000721 ctgccaggaa gcctagaata aaatttaatg cttaattata gttattttaa taacttacat tattttaatg gccatattat 000800 000801 atttgtgtat ttccttGTAA GCCACCTTTT AGCCCATTGT TGGAAGTTAT TTGTACACAA AATTTTAAAA AATCATAAAT 000880 000881 GAAATTAATA GATTCCAGAA TTACATAAAA GAATTAGCTC TAATCAAGAA TTTATATTTG ACTGAATGGT AAAGAAATCA 000960 000961 ATTATTTAAA TGCCATGGAT CTCCAGGCTT TCCTAACCCC CAAGGCTAGA CTT |
Predicted Small Protein
Name | NONHSAT003216_smProtein_95:289 |
Length | 65 |
Molecular weight | 7576.0862 |
Aromaticity | 0.046875 |
Instability index | 62.5484375 |
Isoelectric point | 5.70330810547 |
Runs | 10 |
Runs residual | 0.00765625 |
Runs probability | 0.0259936406995 |
Amino acid sequence | MQLTVKLKLLIVNINLQGLLMQTERKCCLEALLDLDILWENFFGEMLRRSSMSQERIILI HMLD |
Secondary structure | LLEEELEEEHHHHHHHHHHHHHHHHHHHHHHHHLLLHHHHHHHHHHHHHLLLLHHHHHHH HHLL |
PRMN | - |
PiMo | - |