NONHSAT003236
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT003236 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(AS) |
Length |
841 nt |
Genomic location |
chr1-:52627858..52628698 |
Exon number |
1 |
Exons |
52627858..52628698 |
Genome context |
|
Sequence |
000001 TTAAAAGAAT CTGGAAGAAT AAATGGGTCC TAAGTAAATG AGTCTTCACT CTCAGTCAAA ATCTCCAACA GGAACTCCTG 000080
000081 CTTGTGTAAA ATTGGAGAGA TGGTCAGGAT CTCGTAGTCC TTCAAGGGTT TTCAAACACT CTGAATCCCA TTCTCGATCA 000160 000161 AGATCAAAAT GTCAAGGAGG CATTCTCATC GACGTTACAC ACTTGATCCA GATCCCACTC TTGATCCAGA TACCACTCTC 000240 000241 ACAGGAGACG AAGTAGCTCA TATACACCAG AATACTGGCA GTGAAGGAGC CGAAGTCATT CTCCAATGTC TAACCAGAGA 000320 000321 AGACACACTG GCAGAAGGGC AAATCCAGAT CCCAACACTT GCCTTAGAGT GTTTGGCCTT AGTTTGTACA CAACAGACAG 000400 000401 AGATCTTCGT GAAGTATGTT CTTGATATGG ACCTTTGAAT GGTGCCAATG TGGTTTACAA CCAGCAAACT GGGCGATCTC 000480 000481 AAGGATTTGC TTTTGTGCAT TTTTAGGGAA TAGATGACTC AAAGGAGGCT ATGGTAAGGG CAAACAGAAA GGAGCTGGAT 000560 000561 GATAGAAGAA ATTCGGGTGG ATTATTCTAT TACCAAGACA ATGCGCACAC CTATACCAGG CATCTATATG GGCAGAACTC 000640 000641 Atagtggtgg tggcggaggt ggtggcaaag gcggcagtgg aggtggtCAC AGACGTCGAG ATTCTTACTA TGATAGAGGA 000720 000721 TATCATCGTG GATATGACAG ATATGAAGAC TATGATTACC GGTACAGAAG ATGATCACCT TCTCCTTATT ATAGTCGATA 000800 000801 CAGATCACAA TCAAGATCTC ATTCCTGCAG CCCAAGACAC T |
Predicted Small Protein
Name | NONHSAT003236_smProtein_305:424 |
Length | 40 |
Molecular weight | 4537.0473 |
Aromaticity | 0.0512820512821 |
Instability index | 55.1358974359 |
Isoelectric point | 9.67266845703 |
Runs | 7 |
Runs residual | 0.0107466063348 |
Runs probability | 0.0198601963308 |
Amino acid sequence | MSNQRRHTGRRANPDPNTCLRVFGLSLYTTDRDLREVCS |
Secondary structure | LLLLLLLLLLLLLLLLLEEEEEELLEEEELLHHHHHHLL |
PRMN | - |
PiMo | - |