NONHSAT003387

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT003387

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1873 nt

Genomic location

chr1+:55202362..55207980

Exon number

2

Exons

55202362..55203337,55207084..55207980

Genome context

Sequence
000001 atagttattt gtttgatcag ttcCCCTCCT GTCATCACCA CTGGCCCCTC TCCTATGTGG AGCCTTCCTC ACCCTACTTG 000080
000081 GACTCTTGAC TCCACATGTT ACGCTGCTGC CCCAGCGTGG GCGTCTTTCT CACCCCGCAC AGACTCTGAC ATCCCACACT 000160
000161 GCTCAACGAC CCTACATGGA CATCCTCCTC ATCCTGCTTG GGCTCTGACA CCCTACAGCA GGCCACCCCC TGCCATGAGT 000240
000241 GGTCACCCTC CTCACCCTAG TTGGGCCTGT AAACTCCATA TTACTTGTCC CCATGCATGG ATACCCTTTT CACCCCACAT 000320
000321 GGCCTCTGAC ACCCCACCTT GGACAGCCAT CTTACAAGGG AGCACTTCTT CCCCTGCTCA GGCCTGCTGG CCCCCAGCAT 000400
000401 GGATGCTCTT CTTCACTGGT CCTGCTCTGA CACCCCCGGG AGCTTCCTGT GCAGGCGTCT TCCTCACCCT GCTTGGGCTT 000480
000481 TGACACCCTG CACAGACATC CTTCTCTCCT TCTTCAGGCT CTTTCCTTCT CTGAGCCACC ATAGCTTTCT CCTCCACATA 000560
000561 CCTGATGGCT TTAGTCTGAT TTGTTAGGGA AAGGAGGGCT ACATaggcct ggccttgagt cttgattctt ctgtttacca 000640
000641 gcagggtaat gttggcaagt tgttgttctt ctctgagcct tgattctgtc tttggaagat ggaactgata atagcctctt 000720
000721 ttacagtggc atggcggggg ggtactaaat gcaaagcacc cagctacaca accatataaa ggaggcattc aaCTACTAAC 000800
000801 CGTTGCCATC TTTTTAATTT TCCCTGGGCT TAGCCTCAAC TAAGGCTGCC GAAGCCTTTA TCTCTGACTC TTGCCCTTCT 000880
000881 GTTAATCTTG CAGGTCTACT TTGAGGATGA GGACAGGGCA GAACTATACC GGGTGCCTGC CAAGAGCACC TTGCTACAGG 000960
000961 TTCTACAGCA CCAGAGGTAC TTTGTAAAAG CCCTGACACC AGCATTTTTG GTCTGTGTAG GATCCTCTCC TTTTTGCAAG 001040
001041 AATTTTCTCC GGGGGAGAAA GGTGTACCAG ATACGATGAC TAAGCCAGGG CCCCTGGATC TCCTCCCTTA CCCTCCTCTG 001120
001121 CTGGGAACCT AGCACACCTG AATCAGCTGG ACATACTGCT GGAGTCCAGT GCTTTCTTTC CGTCACCCTG GGGATAGTCC 001200
001201 TTCCTGGCAT CGTGGTGGGG GAGGAGCCTC TGGCTTCCCT AAACTGCAGC CTCTCTGGCT GGTCTTCACT TTCCTCAGTT 001280
001281 GATATAAAAC TCTGGGTCTT GGCCATGATG TCCTTGGACT CCATCGCTAA AGGGACCATC TGCTGCAGTT ACCACAGCAA 001360
001361 CTGACCTGAG CGGCACCCTG GTCTGTGGAG ATGGACTCAG GATCCAGTGA CATGATTCTG AACTTTTGTG GAGTTTGACA 001440
001441 CCTTAGAGAA GCTACCCCTC AAACTGCACA TCTACACACA AACAAACAAT GCATAGGATT CCAAGGCTTT AAAGCTGAGA 001520
001521 GACCCTGGCC TCAAGTTATT TCATGCGCAC AGAGGGAAGC CATGTGGGGT TGCTGAAGAT GCCTTGAGGT GAAATGGGGG 001600
001601 CAGGAAAGCC ACATCTTGCT CTGCATTTAT AAAGACCGTA CAAACTCAGA TCCTTGGTAC CCCTAAAAAG ATTGCCAATT 001680
001681 TTCTTCATCT TTGCCATATG GAGGACTGTG ACAGACTTTG GACAGTGGCC TCTTGAGTTC CTCTGCAGTT TTGACATTTA 001760
001761 GGATTTTGTG TCTTTTAAAC TGGAAAATCT TCTAGCATGT TGGGTTGTTA CAGAGTATAT TTTTGTCTGC AGCTGTTTGT 001840
001841 TGCCCCATTC CTAAGAGGAG TTTATCCATC CTG
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Predicted Small Protein

Name NONHSAT003387_smProtein_398:586
Length 63
Molecular weight 7039.1703
Aromaticity 0.129032258065
Instability index 43.5387096774
Isoelectric point 6.46966552734
Runs 9
Runs residual 0.00847926267281
Runs probability 0.0306286678836
Amino acid sequence MDALLHWSCSDTPGSFLCRRLPHPAWALTPCTDILLSFFRLFPSLSHHSFLLHIPDGFSL
IC
Secondary structure LLEEEELLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHLLLLLLLLEEEEELLLLEE
EL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLL
LL
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