NONHSAT003588

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT003588

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

4021 nt

Genomic location

chr1+:60988410..60995163

Exon number

3

Exons

60988410..60990642,60991869..60993083,60994591..60995163

Genome context

Sequence
000001 cagacaaggg aagagagctt gtacaaagaa actccccctt ataaaaccat cagatcttat gacacttatt cactatcata 000080
000081 agaacagcac aggaaagtca tgcccccatg attcaattac cccccaacag atccctccca caacaggtgg gaatttaaga 000160
000161 tgatatttgg gttgggacac agccaaatca tatcaCACGT GGTATGATAT ACCAGAAAAT GTGGAAGAAA ATGctatgtg 000240
000241 gaatattgtc aatcatccta ctagagagaa aacaagcact ggaggatctc actgacaatt aaatgcttag cccaaagcca 000320
000321 gagagacaca ttagtttctc tcacaagaca ctggccagaa ttggtcacat gggaatccag gcagtacaat cttactatgg 000400
000401 gccaagaagt cagagagttg agactattca gtgatcagca taaataaata GTATACCATC CTTTATAATT TTCTTTCATT 000480
000481 TTTGCCTTAA AATTATACTA GCTTAATTTC CTAGATTCTT GCTTTAACTT TTTAAGTTTT TTATTCCTCT TAAGATTTCT 000560
000561 TATTTTCTTG CCACTTTGAT GGTGTATTCT GAAGTTTCAT TTTATATATT ATTCATTGGT TTGGGGGGAA TTTGTTCATT 000640
000641 TACCTTTTAG ATGAAAGGCT TTTTTATATA TCTGGTATAC TCTAGTATAC TGCTCCAGAG ATAATGAAAA TAGAAATTTT 000720
000721 ACCACTCACT TTCAAAGCCT TGAAAAAAAT GATCCAAATC TTAATGGAAT CATAAAACCA CCTTTCTATG GTGGTCCTAT 000800
000801 TATCTAAATg tcaggagaac tactcctcat tctatttctt actaaataac tttgaaacca tggtcagatc atttcccctc 000880
000881 tctggaccta ctttccttaa ctataaagca tctaggtagt gtaaatgacc tttcaggggc tgccccaaca tactatTCAT 000960
000961 TTATCAGTTT ATTTCACAGT AGAACATGCA TTCTATAATG ATTTTTAACA ATCTCAAATT CCAAACCAAA TATTTCTTTT 001040
001041 TCAATGGCAG GCTTGTTGCT ACTTAAAGCT TTTCATGGAA GCTCTTGACT CAAGAATGCT ACAAAAATAG GCTCTTGTCC 001120
001121 TCTTCTTGCA TCTTGCAGAT GTACAACATT AGCATAAAGA GATGTTGGAA AAAAGGTGCC CTCTTCTACC ATGTAGTTCC 001200
001201 TTTGCTGCTA CGTGAACCTC ATATATTCTC ACCTCCTTCT TGAAATACTT GCAACAGAGT ACATAAAGGA TAGCTGAACA 001280
001281 TTCTTTGGAG AGGACAATTG TAGTTTAATC CAACCTTTGA AAAAGCTTTG CTCCTCATTC AAATTCTTTA GATGCTCTCA 001360
001361 GTGCGTAAAC TACATGTCAT GGTACATACA AAAGGGAAGA GAAAAACACA ATtgtcatgg tcagtttgag atgctacaac 001440
001441 aaaaatgcca tagactggta gactgggtgg tttaaacaat tacatttatt tctcacagtt ccagtatctg gtgagggctc 001520
001521 acttccttgt ttgcagacag ctaccttctt gctgtatcct cacattgctg agggagggat cccgtgtttc ttcctctttt 001600
001601 tataagggca ttcatctcat tatgaaggcc tcatcccaat gacctaatct aatcctaatt acttcccaaa ggccccacct 001680
001681 gcaaatacca tcacatcgag gactaaggtt ttactgtatg aattttgtgg ggaGGTGAGG AATAGCAGAT GAAACACATT 001760
001761 TAGTCTGGAG CAACAATTAA CATTGTTTTA AAAAACCACC ATGTCTTTCA AAATATATgt attttcccct aatgattaca 001840
001841 tttatttctc acaacaatcc ttgaggtaga tattgttata cctccttttg gatgtgaaaa ctgagttcac aaaggataat 001920
001921 taagagattc aagacttcac aTTTGTACTG CACTGTCTAC CAAAGCTCAT CAGTGTTACT GAAATTACAT GAGAGATATA 002000
002001 AATCTAAGTA AATAGAACCC CCTGCCTCAT GGTAATAAGT AGAAGACTCA GGTATAAGGC AAGAACAACT CCGTCAAGAT 002080
002081 GAGGAAACAC AGGCATTCAC ATACCCGCTG ATGCATGAGG ATAGAGAGCA TGGCCTCTGA GCTCAGGAAG ACTGGATTGG 002160
002161 TTTAATTCCC AGAGCTGAGG CTGTAGTAGA TTTCTTTTTA TTTTCTTTAA Ctttatttat ttatttattt gagagactct 002240
002241 gtctcaaaaa ataaataaaa taaaaTAata gcttagttat tttttagtat acctctcatc gtggggtcat ctggtggttt 002320
002321 cttatgatta gtttcaggtt atgcactctt gacagaaata accaagaagt tatgttgtgt tttaaacatg catgaggtca 002400
002401 ggagggaaat gatattattt gtcctattcg tgtagatatt aactttgatc attggttaag atgatgcctg taggcctctc 002480
002481 cagtgtaaac atgtcatttt tttcatttgt aataaatatt tttttcattt tattttattt tattgttgag acaggatcac 002560
002561 tctctgtaac ccaggctgga gtgcagtggt gcaatctcag ctcactgtgg cctcaacttg gggctcaagc gatcccttct 002640
002641 acctcagcct cctgagtagc tgagaataca tacacgcact accacacctg gctaattttt tttttagaga tgcggtctca 002720
002721 ctatgttgtc caggctgcca ttgaactctt aagctcaagt aatccttcca cctcggcctc ccaaagtgct agaattacag 002800
002801 gtgtgcacca ccatgcccag cctaagtaag tatttttatg gagcaaaact tttggggcta gataaatatc ttagtcccat 002880
002881 taatgtttca cccactagct ttattatcta tttataattc ttcctttaag caattaatac tgtgatgttt gcaaatgatt 002960
002961 tctctaattt tatcattcct gcctcattta ttaggtggcc ttttactcca aggaagagct tttacttctt ccacatttat 003040
003041 gtatttgttt atttgtttat atcaTTCTGT ATATCTGTAT GGAGTTCATG TTAcaagttt cctaaccctc aggaacctca 003120
003121 gttcctcctc tgtaaaatgg caatgaaaat atttaccatc taggtttgct gtgtagatta aataagctaa tataggtaag 003200
003201 gtcctCCAAA TCATGAGAAT CACATAAATT GGAGCTACTT ATATTAGTAA TAATAATAAT AATACTTGTC TGACTTTTAA 003280
003281 TATAGTGAGA ACAGTTCAGG GTCATCTtct gtcagtactt tatgaacttg aacgacccat ttaacctctc ttgctctcat 003360
003361 tcttctcacc tataaaacaa aagagttggg ttacatgatc tctaaattca actacaattt taatgtaaga aactaagatt 003440
003441 cTGTACCTca gatgaGTTTT GTGTTTCAGA ATCCCTGTTC TAGGAGACTT AAGAACAggc tgggcatggt ggctcactcc 003520
003521 tataatccca gaactttgga aggccaaagc gggcagatca tttgaggtca ggagttcgag actagcctgg ccaacatggt 003600
003601 gaaaccccat ctctactaaa aaaaattaaa aaatttgcca ggcgtggtgg tgcaggcctg tagtcccagc tgccagggag 003680
003681 gtcaaggcag aagaatcatt tgaacccggg aggcagagat tgcagtgagc tgaggtcata ccactggact ctagcatgtg 003760
003761 tgacagagca agactccatc taagaaaaga aaagaaaaga aaagaaaaAG AACAATGAAA AACATATCAA GTAAGCCACT 003840
003841 AGATCATCAA GTGGTACCAA GATTGGGAGC GCCTTATCAG CTACCAGGAG CACACCACTG GTGCTGACTA ATGGTCTTTA 003920
003921 ATACTTAAAA TTATTTCGAT GAGTTGCTTC ACATGTCAGg tgcaggctct agtctcaaac tccctgggtt ttaccaagac 004000
004001 tttaccattt tccagctatg t
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Predicted Small Protein

Name NONHSAT003588_smProtein_2954:3145
Length 64
Molecular weight 7172.4346
Aromaticity 0.15873015873
Instability index 46.7174603175
Isoelectric point 9.51434326172
Runs 13
Runs residual 0.0613864593456
Runs probability 0.0248257307081
Amino acid sequence MISLILSFLPHLLGGLLLQGRAFTSSTFMYLFICLYHSVYLYGVHVTSFLTLRNLSSSSV
KWQ
Secondary structure LHHHHHHHHHHHHHHHHHHLHHHHHHHHHHHHHHHHLEEEEELEEEELLEEEEELLLLLL
EEL
PRMN HHHHHHHHHHHHHHHHHHLLLLLLHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLL
LLL
PiMo TTTTTTTTTTTTTTTTTTiiiiiiTTTTTTTTTTTTTTTTTTTToooooooooooooooo
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