NONHSAT003609

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT003609

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

675 nt

Genomic location

chr1-:62133749..62134423

Exon number

1

Exons

62133749..62134423

Genome context

Sequence
000001 gccaggctag tctctaactc ctgacctcaa gtgattcacc accctcagct tcccaaagtg cagggattac aggtgtcagc 000080
000081 caccccaaag tgccgggatt acaggcgtga gccactgcac ctggccTTCT TGTTTTTCTT TATCAGACTT TTTCCCCTGG 000160
000161 CAGGCTTTGT GGAGTATTTT CTTTCTCCAT TTTCATGTTT ATTTGCGCCA AATATTCCTT CACTCATTCC TTTCCCCAGC 000240
000241 CTGTAACGGA CCTCCACTGT GCCTGTCCAT AACTGAAGCA CACTTCCAAG TCCGGCTCCA TCCAGTCCTG AGGATTCCAG 000320
000321 CTTTCTTCTC CCCTTTTCCT CATTAAATGT AGGTGGTAGA TAATTTAGGA TCTGTATTAG ACTCTCTATA ATCTGACGTT 000400
000401 TATGTTAGAG TGGTCTTTTC CTTTCTATTT GTTCCTTGAG GGCCAGGACT GACTTATAGA CCAAGACCAT TTTTCACACC 000480
000481 TCTCAGCACT AACATGGGAG ATAGTATGAC Atggagtcag attgcctgag ttcagatcct tgttttgcca cttggtagct 000560
000561 gtgatcttga tcgagtcact tagctttact aaaccatggt ttccttagct ataacttgag aataataata aaacttgtct 000640
000641 tttcttcttc ttcttcttct tctttttttt ttttt
[back to top]

Predicted Small Protein

Name NONHSAT003609_smProtein_194:271
Length 26
Molecular weight 2844.3121
Aromaticity 0.16
Instability index 62.3
Isoelectric point 6.67730712891
Runs 5
Runs residual 0.00830188679245
Runs probability 0.0389683801449
Amino acid sequence MFICAKYSFTHSFPQPVTDLHCACP
Secondary structure LEEEEEELLLLLLLLLLLHHHLLLL
PRMN -
PiMo -