NONHSAT003752

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT003752

Source

NONCODE4.0

Same with

,

Classification

sense

Length

728 nt

Genomic location

chr1+:66723108..66732822

Exon number

5

Exons

66723108..66723209,66723330..66723366,66723476..66723546,66731721..66731770,66732355..66732822

Genome context

Sequence
000001 GTCACTGTAA ATTCAGGAGT CATGAATCTA GTACTAATTT TTTCCTTTCA AGCTCTTGGA ATACCCTTTC GTGCCAAATT 000080
000081 GTGAGTCCTG TCTTATATCC AGACACGGCG ATGACTTGAT TGTAACTCCT TTTGCCCAGG TCCTTGCCAG CTTGCGAAGT 000160
000161 GTGAGAAACA ACTTCACTAT ACTGACAAAC CTTCATGGTA CATCTAACAA GAGGTCCCCA GCTGCTAGTC AGCCTCCTGT 000240
000241 CTCCAGAGTC AACCCACAAG GACAGTGCAT CCACTTTTCT TGGTGTGTTG AGAGCTGCAG AGAGGAAGGG CCACCTTGAA 000320
000321 GGAACACCAT GGAGTTCTGT TGGAACTGAA ATTCTTCTTC ACACAAAATG CAACCAGTTC TATGATATTT GTTAAAGTCC 000400
000401 AAATAATGTT TTCTCCTAAA TCTGTTCCCT ACTAATGTAG CAGTAGATTT GAGAAAAACC ACAGGAGAAA CAATTAAGAT 000480
000481 GAACTCACAC TGAGATCACC TAATGCCTGA CACCTAACGA TGCCTCACAT GCTTTTCTAT TTCCAGCAGC GCTTCATACT 000560
000561 TAAAATCTTT CTCTCTTGGT TGTTGTGTTT TCTTTCTGGT ATCCTGATCA TAAGTATAAC GGAAGTATTA CAAAAGCTTA 000640
000641 GCTTCTAAAA GAAGGGAACA AAAGCAGCAG ATTCTATTGG CTCATTGGCT TCTGAAGTAT TTGTGGTGCA TGCtttttaa 000720
000721 aatatttt
[back to top]

Predicted Small Protein

Name NONHSAT003752_smProtein_194:394
Length 67
Molecular weight 7278.2663
Aromaticity 0.0606060606061
Instability index 46.1743939394
Isoelectric point 6.89031982422
Runs 11
Runs residual 0.0160587915079
Runs probability 0.0422989834755
Amino acid sequence MVHLTRGPQLLVSLLSPESTHKDSASTFLGVLRAAERKGHLEGTPWSSVGTEILLHTKCN
QFYDIC
Secondary structure LEEELLLLEEEEEELLLLLLLLLLHHHHHHHHHHHHHLLLLLLLLLLLLLLEEEEELLLL
LEEELL
PRMN -
PiMo -