NONHSAT003752
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT003752 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
728 nt |
Genomic location |
chr1+:66723108..66732822 |
Exon number |
5 |
Exons |
66723108..66723209,66723330..66723366,66723476..66723546,66731721..66731770,66732355..66732822 |
Genome context |
|
Sequence |
000001 GTCACTGTAA ATTCAGGAGT CATGAATCTA GTACTAATTT TTTCCTTTCA AGCTCTTGGA ATACCCTTTC GTGCCAAATT 000080
000081 GTGAGTCCTG TCTTATATCC AGACACGGCG ATGACTTGAT TGTAACTCCT TTTGCCCAGG TCCTTGCCAG CTTGCGAAGT 000160 000161 GTGAGAAACA ACTTCACTAT ACTGACAAAC CTTCATGGTA CATCTAACAA GAGGTCCCCA GCTGCTAGTC AGCCTCCTGT 000240 000241 CTCCAGAGTC AACCCACAAG GACAGTGCAT CCACTTTTCT TGGTGTGTTG AGAGCTGCAG AGAGGAAGGG CCACCTTGAA 000320 000321 GGAACACCAT GGAGTTCTGT TGGAACTGAA ATTCTTCTTC ACACAAAATG CAACCAGTTC TATGATATTT GTTAAAGTCC 000400 000401 AAATAATGTT TTCTCCTAAA TCTGTTCCCT ACTAATGTAG CAGTAGATTT GAGAAAAACC ACAGGAGAAA CAATTAAGAT 000480 000481 GAACTCACAC TGAGATCACC TAATGCCTGA CACCTAACGA TGCCTCACAT GCTTTTCTAT TTCCAGCAGC GCTTCATACT 000560 000561 TAAAATCTTT CTCTCTTGGT TGTTGTGTTT TCTTTCTGGT ATCCTGATCA TAAGTATAAC GGAAGTATTA CAAAAGCTTA 000640 000641 GCTTCTAAAA GAAGGGAACA AAAGCAGCAG ATTCTATTGG CTCATTGGCT TCTGAAGTAT TTGTGGTGCA TGCtttttaa 000720 000721 aatatttt |
Predicted Small Protein
Name | NONHSAT003752_smProtein_194:394 |
Length | 67 |
Molecular weight | 7278.2663 |
Aromaticity | 0.0606060606061 |
Instability index | 46.1743939394 |
Isoelectric point | 6.89031982422 |
Runs | 11 |
Runs residual | 0.0160587915079 |
Runs probability | 0.0422989834755 |
Amino acid sequence | MVHLTRGPQLLVSLLSPESTHKDSASTFLGVLRAAERKGHLEGTPWSSVGTEILLHTKCN QFYDIC |
Secondary structure | LEEELLLLEEEEEELLLLLLLLLLHHHHHHHHHHHHHLLLLLLLLLLLLLLEEEEELLLL LEEELL |
PRMN | - |
PiMo | - |