NONHSAT003967
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT003967 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
959 nt |
Genomic location |
chr1+:75055018..75087373 |
Exon number |
3 |
Exons |
75055018..75055591,75080890..75080980,75087080..75087373 |
Genome context |
|
Sequence |
000001 CAGACACATA CTGTGCTTTA TTTCATTCCT GAGATGGAAT TCCCATAGGA GGGAATTTAC CGAAAATAGG AAACAGGCTG 000080
000081 GATAGAAATT ATCGAGTAAT TTTTTAAGTG CAAGAGAAGG CAAACAGCAA ACTGAAAATA CATGTATGAT TATGTGACAA 000160 000161 AGAGAGACAC AGCAAAAAAT CTTGAATCCC TAAAGCATTG TCACAGTAGT ATTTCCCAAG CTTTGGCATA GTGCAATGAC 000240 000241 CAAAATCAGC TTCCATGCAT GAGGATGATG GCAGCTCAAC TCAACGGCCA TACTTACCAC CTTCCTCCAA CCCAGGGAGA 000320 000321 CCTGCCTTTT TGTCCTTCAC CTGAGCAGTG CTTTCTTCCC AAAGCTTACT CTTATCCTTT TCCTTTTCTT CTGCAGAAAC 000400 000401 ATGTTTCCCG GACTTCTCAG ATAAACCCTC TGCAATCTCT TGGGTTCCTT TCTCCGTTCC TTCTTTAAGA ACATTCTCAA 000480 000481 AGCTTTCGTC TATTGGCATC GGCTTGGTCT CCACATCTGC TTTTGTTATT TCTTGGTCTT CAATTTCAAT TTCTAAGGAT 000560 000561 TCCTCAATTG GAAGTGACAC CTCCCCATCC TGACTTGATG ATTTCTTCAt ggagcagtgg aaagaacgta gtccagaaat 000640 000641 tagaaggttt tggtccatgg cacagCTGAG CACTGACAAC ACATCCTTCC CTGGGCTTAT TCCATCTGAG AGGGAGATGC 000720 000721 ACATGTATGA TTTCTTCTAC GGTCATTCTG AAGATCGGTG TCATCAATAA TTTGGGCTTG GGACTATCCA GTTTCACAGG 000800 000801 GGCATTCAGT TGATTGAAAA TCCAATATCA ATATTGTTTA TAGTATCAAA ACAATCTACC GATCAAAGTC TCTAAAATTA 000880 000881 CTACAAAAAC CTATTTGATA TCCTATGGCA TTGCCCaatt taaattattt ataaaatatG CAGTAAATGT GTATGCCAG |
Predicted Small Protein
Name | NONHSAT003967_smProtein_608:769 |
Length | 54 |
Molecular weight | 6526.1868 |
Aromaticity | 0.150943396226 |
Instability index | 93.6983018868 |
Isoelectric point | 5.43572998047 |
Runs | 6 |
Runs residual | 0.0470547630005 |
Runs probability | 0.0372136842725 |
Amino acid sequence | MEQWKERSPEIRRFWSMAQLSTDNTSFPGLIPSEREMHMYDFFYGHSEDRCHQ |
Secondary structure | LLLLLLLLHHHHHHHHHHHHLLLLLLLLLLLLLHHHEELLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |