NONHSAT003971
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT003971 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
513 nt |
Genomic location |
chr1+:75214325..75229673 |
Exon number |
4 |
Exons |
75214325..75214506,75217976..75218109,75227343..75227443,75229578..75229673 |
Genome context |
|
Sequence |
000001 AAAAACCTTA ATAGCTTTTA GGGTTATATA TGTTTCTGTA GTTTGTGGAG CCAAACAGAT GATCTGGTTA CCCACAGTAT 000080
000081 CAAAATGTAA CAAGTTTTAT TTTCTTACAG CATTCCATGG CAATAGATTC TGGTTTCAGG AACTCTGGCA TAACGGTGGG 000160 000161 AAAGAGAGGA AAAACTATGT TGGCTGTCCG GAGTACACAT GGCTTAGAAG TTCCATTAAG CCATAAGGGA AAACTGATGG 000240 000241 TGACAGAGGA ATATATTGAC TTCCTGTTAA ATGTGGCAAA TCAAAAAATG GAGGAAAACA AGAAAAGAAT TGAGAGGCTG 000320 000321 TGTGGAACAT GAGAAGGATA CCAGTCATTG ACATCACCTA AGATGGTGAC AAGACCTAGA AAGAAAGATC AAGTCAAGCA 000400 000401 TAGAAGTTTT CATCAATGTT TTACAACTGC CTACAGCATG CTTTGGAAAG GGAAACGATG ACTAACTTAC ATCCCAAGAT 000480 000481 CAAAGAGAAA AATAACTCAT CATATATTCA TAA |
Predicted Small Protein
Name | NONHSAT003971_smProtein_116:331 |
Length | 72 |
Molecular weight | 7949.1999 |
Aromaticity | 0.0422535211268 |
Instability index | 47.9366197183 |
Isoelectric point | 9.57720947266 |
Runs | 11 |
Runs residual | 0.00637509266123 |
Runs probability | 0.0437844261374 |
Amino acid sequence | MAIDSGFRNSGITVGKRGKTMLAVRSTHGLEVPLSHKGKLMVTEEYIDFLLNVANQKMEE NKKRIERLCGT |
Secondary structure | LLLLLLLLLLLEEEELLLEEEEEEELLLLEEEEELLLLEEEELHHHHHHHHHHHHHHHHH HHHHHHHHHLL |
PRMN | - |
PiMo | - |