NONHSAT004118

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT004118

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1569 nt

Genomic location

chr1+:81001439..81119893

Exon number

6

Exons

81001439..81001627,81006273..81006321,81106968..81107086,81109639..81110052,81112245..81112908,81119760..81119893

Genome context

Sequence
000001 CTGAGTGTTA GTTTTAAATA GACTATTGAC AAATTACAGA TTTTTTTCAC GTATTGAAAT TATATTCCAG ATGATTTTGA 000080
000081 GATTTACTGG TATAATATTC TCCTCATGAG GTAGGATGGA AGGGAAGAAA TAGAGAAAAA ATGTTCTGCT CTGAAATAAA 000160
000161 TGTGGTGTTT CCTGACAGCG TTTGTCAAGG AAGGAAAGGT CGAAAATAAA GCACTGATGG AAATACATGA TAAATAAGTA 000240
000241 TTGCCGGAGA GTTTCTGCAA TATGCTACTG CAGTCCATAT GCTTATCAAT TATGAGGATT TTTGGCTTTC GGCTCTGGAA 000320
000321 AATATGAGAA ATATGGGCAA TTACTCTCTG AAGAAAGTTG GTATTCTGGA GCCAATGCAC ATTTAATAAT GAATGTTTTT 000400
000401 TCTTTTATTT CTTTTCTTTC TCTCTTTCTC TCTCtttttt tttttttttt tttttttttt gacaaggtct gactctattg 000480
000481 cccaggctga agtgcagcgg caccatctca gctcactgca acctccacct cctcagctca cgtcattttc ccacctcagt 000560
000561 ctccacagta gctggaacta caggcataca ccacgtgtgt taggctaatt tttgtatttt ttttgtagag atggggttcc 000640
000641 accatgtagc cccggctggt cttgagctca tgagctcaag cgattcacct gcctcagcct cccaaagtgc tgggattaca 000720
000721 agtgtgagcc accATTCCTG CCTCTATACC TCTAAAGGTA TTAGTTTTCC CTAGGTGTTG AATAATTTGA ATGGGAATTT 000800
000801 GAAGGTCCAT GGCTTCCAAA CCAGCAGGAG TTAAGGCTTA ATTGCTTGGA AATACATTTT CATGGCTGAT ACCAGTAACA 000880
000881 GAAAAATGTC TGTATGTCAA GAGGCTCTGT ACTAATCAGT TAACCATAAC ATGTGCCACC CCATACCTTG GGCCAATGTA 000960
000961 ACTGTTAACA GCTTGAAGCT ATTAAAAATG TACCAATGGA GAACTTTCTT ATACTTTTTT CACTAATGTG CTTCTTCACT 001040
001041 CTAAATAAAG GAATAGATAA ATTTTATACT TAACTACTGT CAGAGAAAAG GAAAGTACCT TCGCTTAGTT TGAGCTTCAA 001120
001121 AACATTACAT CCAATGGTGT TCATTAAGGT AACACTTTGA AAGTCACTCA ATTGCTAATA TGCTCTCTCT GCGTCAACTC 001200
001201 AGAGGCTGCC TATTAGATCT AGTTACACTC CAGAGACAGG GATTTGCTTT CCAGCTCTAG AGATCAGGTC AAGAATTGCA 001280
001281 ATAACAATTA GTAATTAGTA GTTAGATCTC AATTTACCAC ATTAGAAGGT CACTCCTCTG AAGCATTTGG TCTCATGAGA 001360
001361 GGAAAGGAAT ACAGGAGACC ATCAACTGTT GACACTTTGA AATCAAGAAA AGAATCTAAG ATTCTCCTTG AAATTgagtg 001440
001441 agccaccgtg cccaaccTCT ACTGGCCATC TTCTTAACAC AGTTATCTTC TACTATCCTC CACCTACCTC CTCGTCAACA 001520
001521 TCTGATTCTC CTAACTTTCA AGTATATCTT GCACGTGTGC CTTTCTCCA
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Predicted Small Protein

Name NONHSAT004118_smProtein_392:607
Length 72
Molecular weight 8502.7174
Aromaticity 0.239436619718
Instability index 44.9985915493
Isoelectric point 10.666809082
Runs 7
Runs residual 0.0499629355078
Runs probability 0.0125545713781
Amino acid sequence MFFLLFLFFLSFSLFFFFFFFFLTRSDSIAQAEVQRHHLSSLQPPPPQLTSFSHLSLHSS
WNYRHTPRVLG
Secondary structure LHHHHHHHHHHHHHHHHHHHHHHLLLHHHHHHHHHHHHHHHLLLLLLLLLLLLLLEELLL
LLLLLLLLLLL
PRMN LHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
LLLLLLLLLLL
PiMo i???????????????????????????????????????????????????????????
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