NONHSAT004197
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT004197 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
905 nt |
Genomic location |
chr1+:84810361..84815622 |
Exon number |
2 |
Exons |
84810361..84810956,84815314..84815622 |
Genome context |
|
Sequence |
000001 ATGGTGAATT ACTACAAAGT ACTAGGTGTG CCTCAAAATG CTTCCTCCCC TGATATTAAG AAGGCTTATC ACCAGTTGGC 000080
000081 TCTGCAGGTA CACCCAGACA AGAACCCAGG GAACAAAGAG GCATCTGAGG AGAAATTCAA ACAAGTAGCA AGAGGCCTAT 000160 000161 GAGGTCTTGT CTGATGCCAG GAAATGAAAT GAGTATGACA AGTCCAGAAG GAACCGAACC AAAAGGGAAA CAGAGGAGAT 000240 000241 GGCAGAGACA AAAAACATTT GGAGGAGGAA CTATGCATTC TCAGGATTCT CAGGTGATGA TTTTTCCCTT GGCCTTGTGG 000320 000321 GTAAAGCCAG GAGATTCCAC TCCTCCATCT TTGATGTGGC TCCCATATTG GACACAGGAT TTTCCACTTT TTTATCTCTG 000400 000401 GGCTCCAGAG CAAGTACCTC TACCTCTGAG ACATTTGAAC CCTTTGTAAG CAGCAGACTG AGAAACTTCA GACTGGTCAC 000480 000481 CATTTGTAGC CAGACAGTAA ATGGCAAGAG AGTTGTTACA AAGAAAGTGC TAGAAGATGT GAGGGGGAAG AATGAAGCAG 000560 000561 AAAAAGACTG TTTCATGAGA TTCCTCCACA TCATTGGAAA TTGATGGAAA ATCCCTGCTA TTGATGACAA GAAATGATGT 000640 000641 GTTGACAGGA CTTCAGTTAA AATTGGGGCC TGCTCTGAAA ATCTACGAAT ATCATGTAAA ACCTCTGCAG ACAAAGCATT 000720 000721 TAAAGAACAA CTCTTCATAG TACAGTCAAA TTGGGGTCTT CGACCTCAAA AAATACATAA TGACATAATT TAGTTTCATG 000800 000801 TAATGAAACT TTGTAAACAG AATACATACA TGTGTATATG TAAAGAATTT CAATCAAATG AAACGTTATC CTATTGGATA 000880 000881 GACTAGGCAA TTCATCAGCT CACCT |
Predicted Small Protein
Name | NONHSAT004197_smProtein_158:448 |
Length | 97 |
Molecular weight | 11115.8066 |
Aromaticity | 0.114583333333 |
Instability index | 96.0553125 |
Isoelectric point | 8.97784423828 |
Runs | 11 |
Runs residual | 0.0196520618557 |
Runs probability | 0.043840632076 |
Amino acid sequence | MRSCLMPGNEMSMTSPEGTEPKGKQRRWQRQKTFGGGTMHSQDSQVMIFPLALWVKPGDS TPPSLMWLPYWTQDFPLFYLWAPEQVPLPLRHLNPL |
Secondary structure | LLEELLLLLLLLLLLLLLLLLLLLLHHHHHHHLLLLLEEELLLLEEEEEEEEEEELLLLL LLLLLLLLLLLLLLLLLEEEELLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |