NONHSAT004268
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT004268 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
691 nt |
Genomic location |
chr1-:86869859..86870549 |
Exon number |
1 |
Exons |
86869859..86870549 |
Genome context |
|
Sequence |
000001 CAAGTCCTCA AAGCCACTCA GTCAAAGAGG GCACTTTTAG CAAAGAAGGA GCAGAGGAAA GGAAAAGGGC TCAGGTTTAA 000080
000081 GTGTCTGGAA TTATTCCTAT ATGATTCTTG GCAGCATAAA TGTGACAAGC TGCAACTCAG ATGACTAGAT GTAAAACCTT 000160 000161 GTGCCTTGGA ACAACCAGAT AAACACTCCT CGGCCTTTGT TGTATGCATC CAAAGGATTA ATGATGTGAG TTTGCTGGTG 000240 000241 CAGAGAATCA TCATAAGGCT TTGCCTGAAG ACATTTTTCA GTGGTGTCTT TGTAGAAGTC ACCCCCTCCC CACCCCTCCA 000320 000321 CCCTCAGCCT AGAAATGCTG CATATAGTGG AACATTACGT GACCTGGGGA TTTTCAAATC TGAAGTCTTT CCAGGAACTC 000400 000401 ATCTTGAAAT GTGGGCAAGC CAAGGTCAAA AGTAAGACCA GTCCCTCTGG CAGACAACAC AGTTATTGGG GAGCACCTGG 000480 000481 GGAGGTTTGG CGTTATTTGC TTAAAAGACG TCATTCACGA AATTGTCTTC CTGGGGAAGT ATTTCCAAGA GATCTCATTG 000560 000561 TTCTTGCACC CTTTCCACCT CCTTGTGGCC TATCATGCTA CCAAGAATAA CATGGTGGGC TTCCTCAAGG GAATGGGCTC 000640 000641 ACCTGGCTAT CAGAGTGAAG GCATGAATGA GCTCATCCAC AGCTGAACTA G |
Predicted Small Protein
Name | NONHSAT004268_smProtein_611:685 |
Length | 25 |
Molecular weight | 2569.9291 |
Aromaticity | 0.0833333333333 |
Instability index | 45.2166666667 |
Isoelectric point | 5.38067626953 |
Runs | 5 |
Runs residual | 0.0267857142857 |
Runs probability | 0.0170111287758 |
Amino acid sequence | MVGFLKGMGSPGYQSEGMNELIHS |
Secondary structure | LEEEELLLLLLLLLLLLHHHLLLL |
PRMN | - |
PiMo | - |