NONHSAT004380
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT004380 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1134 nt |
Genomic location |
chr1-:90227614..90229337 |
Exon number |
2 |
Exons |
90227614..90228299,90228890..90229337 |
Genome context |
|
Sequence |
000001 TCTAGCACTA AAGCTAGAAG GGAAGCTTGA GGCCACATTG TGGAGTGCCA AGAGGTTTGA ACTTTTGCCT GGTTTGAACT 000080
000081 TTTACCTTCT TAATCTTTTC CCCGCATCCC CACATTTGAG GACAGGACAC CTCCAGGAAC TGCAGCTCAG CAACAGGGGT 000160 000161 TCAGCGTGAG CGCGGCCTGG GGAGGGTCAT CGCCTTTTTG GGGAGTGTGG GGAGAAACGC GGCTCGCCTT GTCGTGGCTG 000240 000241 GCGATACGCC TCTGCAGGAA GGGTGTGTCT CCCCGCTTGA GGATTCTCCC TATAGATAAA GAGGAGACTC AGCAGAGCCT 000320 000321 TAATTAGAGA TCACAGAGGA CTGACAACGA GCGTCCGGAA GACGAATTGG CAGCGAGGTG CATGGATTCG ATACAGAAGC 000400 000401 TGGAGATAGA GTCCAGCTAA CAGACCACTG CAGTTCGACG GAGCCAGATC CCAGGTCTGA AATGGAAAGA GATGTTACCC 000480 000481 TAGATGCCCG GAGACAGCGG GGCCGCAGAG ACCTCGCACA GCCGAATAGC AGTGGAGCAG gtgtgtgtgt gtgcatgtgc 000560 000561 atgtgtgcac gctgtgaggg tgtggtgtgt gtAACATGCT CCCATGTGTC CGTGTGCCCG CTCTGCAGGG GGAATGTTAA 000640 000641 TGTTTGATTG TTGTTTGGCT TCAGCCCAAA AGAGAAACAA ATAATGAGGT GAACGGAAAT GAGCTGGAGT CTCTGCTTTC 000720 000721 ACCGCTAATT AGTCCCTGCT CGATTTTGAC GAAGAAGACA TACAATAGAC ACAAGTGAGC AACGAATGAG AAACTCAGGG 000800 000801 ACCTAGGCTG GGGAAAGGGC GTCGGGTGGG GGGTGTGTGG GCAGGGCTAG GAAGGGAATC TCAGAAGCCA GTGTGCCTGG 000880 000881 ATCAGGCCGA CAGGTCATTC CCACCCTTAG ATGAAAATCT GCGCATTATT CCATCTTGGC TGGCATCTCT TATGGGCTGG 000960 000961 CCTTCATCTT ACTAACGCCA TTTCACTTTT TGAAGGGTTG ACAGTTACCT TCTTCACCTT CCCCTGGGCA GTTCTTTGTT 001040 001041 GTCTTTGTCA GGCTGGCCCC TGTCCATATT TCTCAGAGCC CTGGTCACAG CTCTCTTACT CACCAGCTGC TCAGACAAAC 001120 001121 CCAGCCTTGA CCTG |
Predicted Small Protein
Name | NONHSAT004380_smProtein_461:646 |
Length | 62 |
Molecular weight | 6573.669 |
Aromaticity | 0.0 |
Instability index | 41.1114754098 |
Isoelectric point | 8.46551513672 |
Runs | 11 |
Runs residual | 0.0275108347466 |
Runs probability | 0.0440815146698 |
Amino acid sequence | MERDVTLDARRQRGRRDLAQPNSSGAGVCVCMCMCARCEGVVCVTCSHVSVCPLCRGNVN V |
Secondary structure | LLLLLLHHHHHHLLLLLLLLLLLLLLEEEEEEEEEEELLLEEEEEELEEEEELLLLLLEL L |
PRMN | - |
PiMo | - |