NONHSAT004380

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT004380

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1134 nt

Genomic location

chr1-:90227614..90229337

Exon number

2

Exons

90227614..90228299,90228890..90229337

Genome context

Sequence
000001 TCTAGCACTA AAGCTAGAAG GGAAGCTTGA GGCCACATTG TGGAGTGCCA AGAGGTTTGA ACTTTTGCCT GGTTTGAACT 000080
000081 TTTACCTTCT TAATCTTTTC CCCGCATCCC CACATTTGAG GACAGGACAC CTCCAGGAAC TGCAGCTCAG CAACAGGGGT 000160
000161 TCAGCGTGAG CGCGGCCTGG GGAGGGTCAT CGCCTTTTTG GGGAGTGTGG GGAGAAACGC GGCTCGCCTT GTCGTGGCTG 000240
000241 GCGATACGCC TCTGCAGGAA GGGTGTGTCT CCCCGCTTGA GGATTCTCCC TATAGATAAA GAGGAGACTC AGCAGAGCCT 000320
000321 TAATTAGAGA TCACAGAGGA CTGACAACGA GCGTCCGGAA GACGAATTGG CAGCGAGGTG CATGGATTCG ATACAGAAGC 000400
000401 TGGAGATAGA GTCCAGCTAA CAGACCACTG CAGTTCGACG GAGCCAGATC CCAGGTCTGA AATGGAAAGA GATGTTACCC 000480
000481 TAGATGCCCG GAGACAGCGG GGCCGCAGAG ACCTCGCACA GCCGAATAGC AGTGGAGCAG gtgtgtgtgt gtgcatgtgc 000560
000561 atgtgtgcac gctgtgaggg tgtggtgtgt gtAACATGCT CCCATGTGTC CGTGTGCCCG CTCTGCAGGG GGAATGTTAA 000640
000641 TGTTTGATTG TTGTTTGGCT TCAGCCCAAA AGAGAAACAA ATAATGAGGT GAACGGAAAT GAGCTGGAGT CTCTGCTTTC 000720
000721 ACCGCTAATT AGTCCCTGCT CGATTTTGAC GAAGAAGACA TACAATAGAC ACAAGTGAGC AACGAATGAG AAACTCAGGG 000800
000801 ACCTAGGCTG GGGAAAGGGC GTCGGGTGGG GGGTGTGTGG GCAGGGCTAG GAAGGGAATC TCAGAAGCCA GTGTGCCTGG 000880
000881 ATCAGGCCGA CAGGTCATTC CCACCCTTAG ATGAAAATCT GCGCATTATT CCATCTTGGC TGGCATCTCT TATGGGCTGG 000960
000961 CCTTCATCTT ACTAACGCCA TTTCACTTTT TGAAGGGTTG ACAGTTACCT TCTTCACCTT CCCCTGGGCA GTTCTTTGTT 001040
001041 GTCTTTGTCA GGCTGGCCCC TGTCCATATT TCTCAGAGCC CTGGTCACAG CTCTCTTACT CACCAGCTGC TCAGACAAAC 001120
001121 CCAGCCTTGA CCTG
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Predicted Small Protein

Name NONHSAT004380_smProtein_461:646
Length 62
Molecular weight 6573.669
Aromaticity 0.0
Instability index 41.1114754098
Isoelectric point 8.46551513672
Runs 11
Runs residual 0.0275108347466
Runs probability 0.0440815146698
Amino acid sequence MERDVTLDARRQRGRRDLAQPNSSGAGVCVCMCMCARCEGVVCVTCSHVSVCPLCRGNVN
V
Secondary structure LLLLLLHHHHHHLLLLLLLLLLLLLLEEEEEEEEEEELLLEEEEEELEEEEELLLLLLEL
L
PRMN -
PiMo -