NONHSAT004407
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Contents
[hide]Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT004407 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
614 nt |
Genomic location |
chr1-:91248394..91251736 |
Exon number |
2 |
Exons |
91248394..91248980,91251710..91251736 |
Genome context |
|
Sequence |
000001 gacagattta agattcaaga aagagggGTC GGCTGCCTCC AATCCTGAGG TCATCACTCA TCAAGAGGGG ATAATCCCAG 000080
000081 GGACAGCAGG ATCTGCTTCG TTACTTGGAT TTAGGAGCCA GAAACCCATC AGGCAACTAA ACAGTAACAA TGACCCGCCA 000160 000161 TTAAACACAC TGAGAGAAGA GCATGATGAA GAGTTTGTAC AAGAAGAAGC CAGGAGCACT TGCTGACAAT GCTTACAGAG 000240 000241 ACGCAGGCTT CTATGAGCTC TGCCTGTTGA ACTGCAGTAA AAATAGATCT CCTTCCCCAG AGAGGCTTGG ATGTGGGCAC 000320 000321 AATATCAGTT CAGACGATGG TCAATGCATG TACTTAATAG agtgaaaaga ctttggactg tgaagtcaga ttacctgggt 000400 000401 ctgaattgtt attcttctac ttctttgtag tatgctttca ccacattaaa aattgtctga gcctcaattt ttttatctgc 000480 000481 aaaatggagc taatacctac acaggggctt ttaagagaat caaatgcaac aatgtttgaa aagcAACATA CTCCCCTTTA 000560 000561 TGGAAAAAGA GCCTGTAAAG GAACCAATAC AATggctggg cgtggtgact caca |
Predicted Small Protein
Name | NONHSAT004407_smProtein_182:364 |
Length | 61 |
Molecular weight | 6704.6265 |
Aromaticity | 0.0833333333333 |
Instability index | 67.3585 |
Isoelectric point | 7.64630126953 |
Runs | 11 |
Runs residual | 0.0335992907801 |
Runs probability | 0.0461209872976 |
Amino acid sequence | MMKSLYKKKPGALADNAYRDAGFYELCLLNCSKNRSPSPERLGCGHNISSDDGQCMYLIE |
Secondary structure | LLHHHHLLLLLHHHHHHHHLLLLEEEEELLLLLLLLLLLLLLLLLLEELLLLLEEEEEEL |
PRMN | - |
PiMo | - |