NONHSAT004454
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT004454 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
755 nt |
Genomic location |
chr1+:92798799..92852790 |
Exon number |
5 |
Exons |
92798799..92799030,92801904..92801984,92811403..92811471,92846281..92846430,92852568..92852790 |
Genome context |
|
Sequence |
000001 ctcaaattta aatctaattc tcaagtctag ttattttcct actgtgccac aGATACAAAC TTTTGTGTTT TAATGTTTAT 000080
000081 TGTTCTGCTT ATCAAAGAAA GAATGTAAAC TTATGATTCT GTTTTGCTTT GTTTAAAAAT GTGATTCAGC ATGATTCCAC 000160 000161 CTTTCCACTG ATAGACTCAA GTTCCCAGAA CCAGATTAGA AAACGCATCG TACTTGAAAA GTTGAGTAAA GTGTTGCCTG 000240 000241 GGCTTCTGGT TCCTCTTCAG ATTACATTGG GAGATATTTA CACACAACTT AAAAATCTTG TTCGAACTTT CAGGTTAACA 000320 000321 AATAGAAATA TTATACACAA ACCTGCGGAA TGGACTTTAA TTGCTATGGT GTTGCTGTCA TTACTGACCC CAATTCTTGG 000400 000401 CATTCAGAAA CATTCTCAGG AAGGTATGGT GTTTACACGG TTTCTAGACA CCCTCCTTGA AGAATTACAT CTAAAAAATG 000480 000481 AAGACCTTGA AAGTCTAACC ATCATATTTA GAACCAGCTG TTTACCAGAG TGATATATTC CATGAAGACA AAATAGAAGA 000560 000561 TGAACTTCTA TTCACCGTTT CTGGAATTCT AGCCGCCATG ATGGTCTGGT GGTGACTGAT AACTAGTTTT ATTCCAAGAC 000640 000641 ATACCTTTAC CTCTTTAAGT TTCAATCTCC CATCTCCCAG TCCTTCAGTC CCCAACTGCA GAGGATGACC TCCCCAGATA 000720 000721 GAGGAGAATC ATTACTCCAA CAAGAATAAC CAAGT |
Predicted Small Protein
Name | NONHSAT004454_smProtein_365:532 |
Length | 56 |
Molecular weight | 6327.3889 |
Aromaticity | 0.0545454545455 |
Instability index | 43.5254545455 |
Isoelectric point | 4.91778564453 |
Runs | 8 |
Runs residual | 0.00606060606061 |
Runs probability | 0.0493729023142 |
Amino acid sequence | MVLLSLLTPILGIQKHSQEGMVFTRFLDTLLEELHLKNEDLESLTIIFRTSCLPE |
Secondary structure | LLHHHHHLLLLLLLLLLLLLLHHHHHHHHHHHHHHLLLLLLHHHEEEEELLLLLL |
PRMN | - |
PiMo | - |