NONHSAT004531
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT004531 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1244 nt |
Genomic location |
chr1+:93820532..93826492 |
Exon number |
2 |
Exons |
93820532..93821332,93826050..93826492 |
Genome context |
|
Sequence |
000001 aacctatcat aggcactaAA GAGGAAAAGC CTTTGAAGCA GGCGTTAGTA CATGCAATGT TATAATTCAT ATGAATATGA 000080
000081 GGTACAAAAG AAGAGGTGTT GATGTTTTAA AAACATTAAT GGCTATTTAT TGATATTGCA GACCACCTAG AGAATGCTAA 000160 000161 ATTGAACATT TAGTGACAGA AGATTTTCTC CTGGATACTT TAAATACATA AAAACTTGGC AGAGttttta tgaaatataa 000240 000241 attttattgt attcatttac atattaaaaa ataGACTCAG AGGCGGAAAA ACTTCCTTGA AATTGTTTGt catttgttct 000320 000321 acagttactt actgaagtca ttactattta ccaagcatca tgctaggtgc taggcttaca agagtgaaca aggagacagg 000400 000401 gttcctgtca ttatagagct taatctactg gggaagattg aGTGGGAAAG ATTGACTTAA ATAAAACAGT aagttcagaa 000480 000481 agttaggaag tgttggagtc tatatttaaa cttaggtatt ttgacccaaa agcctgtact gtttctaaca taccatgctg 000560 000561 atgctctAGC CTCCATTTTA TATGCTTAAA CTTATTATGG GGCTTTTAAA TAGAATATGT ATTATCCTTG CCAGGGCAAA 000640 000641 ATATAAAGAA ATAATTGACT GCCTGCTATA TCTGTCTTCA CCTTTCTATC CCTATTATCT GTTTTTTTAT TCCTCTTTTT 000720 000721 TGTCTCCCTT GTTTCTTACC CTGACTTATG TATGAAGATC TCTAGTATTT CTTTACTATT GTGAGGATGA CCAGCGGAGA 000800 000801 GGCTAGACAG CAACAAGCAG AATTGGCCCA ACAGGAATGG CTTCAAATGC AGCAAGCTGC CCAACAAGCC CAGCTTGCTG 000880 000881 CTGCCTCAGC CAGTGCATCT AATCAGGCGG GATCTTCTCA GGATGAAGAA GATGATGATG ATATCTGAAA TTCACCAGCT 000960 000961 GAGTTTCTAT TTCTTCTATA AATGTTTTTC CCTGCACAAC AAAAACAGTG AAAGAAATGC TTATCTGTAA TTTTGTATGC 001040 001041 ATCTTGGTGG ACTTGTCATT GGTATTCTAG GGATGTCTGC TATTAAGTTT CATCTATTGT GTGCTATACA TGTAAAAACT 001120 001121 GTCTCTTTGA ACTATTGAAA ATTTAAGGTT CAGTATAATA TCAATTTTGA ATTTTTAATG GTGTTTATGA AATTTTAGAT 001200 001201 AGCAGCGAGT CCTTCGTTTG ATCAATAAAC AGTGTTACAG ATAA |
Predicted Small Protein
Name | NONHSAT004531_smProtein_581:754 |
Length | 58 |
Molecular weight | 6797.2392 |
Aromaticity | 0.210526315789 |
Instability index | 58.3056140351 |
Isoelectric point | 9.03155517578 |
Runs | 8 |
Runs residual | 0.0135964912281 |
Runs probability | 0.0424174174174 |
Amino acid sequence | MLKLIMGLLNRICIILARAKYKEIIDCLLYLSSPFYPYYLFFYSSFLSPLFLTLTYV |
Secondary structure | LHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLHHHHHHHHHLLHHHHHEEEL |
PRMN | LLLLLHHHHHHHHHHHHHHHHHHLLLLLHHHHHHHHHHHHHHHHHHHHHHHLLLLLL |
PiMo | iiiiiTTTTTTTTTTTTTTTTTToooooTTTTTTTTTTTTTTTTTTTTTTTiiiiii |