NONHSAT004581
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT004581 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1521 nt |
Genomic location |
chr1+:94776811..94778550 |
Exon number |
2 |
Exons |
94776811..94778046,94778266..94778550 |
Genome context |
|
Sequence |
000001 TTAATGTCTT TCCTTCTAAA GGGAGCTTGC TGCCTTCGAT GAGCATTGAT TTCCCTCTGT TCATGGAGGA TGAAGGCAAA 000080
000081 ACTCCCAATG GAATCAACCT TTTCTtctct ccctctctct ctctttctct ctTGTCTCTA CCCACCAACC AGTCTGTCCC 000160 000161 TGGAGAGAAC GTGCCCTCGA CTGCACCTCT GCACCAGAGG CTTGGATAGG TGCAACACAA ATGCTTGTCA GATCAAATAA 000240 000241 AATAATGATG TTATTATGTC TTAAAGAAGA CCATGTTTGA GGGGTAAGAG AAAAATGGGG TCTGGAGTTT GGTGCTTAAT 000320 000321 CTTAAAGACC CAACAataac atcaaatttt aagtgatctc aaacccttcg tgctgcctgg caattccagc tgatttcctc 000400 000401 agtcaactca ctcttccagt caagagatta tttcactgat tcttctctct tctcaagccc tcttgctttt aactcttggg 000480 000481 tttgcttctt attttcctga aaaaataaaa gcatagtaag acagcttccg catatgtacc actaagtcca ctaaatgtcc 000560 000561 acatctgtat cctcatatgc tgtctgccct cctattaaca atgcaaggct ccttctgtaa ctatgttctt ctccaaggcc 000640 000641 agccctcacc tgggccctgt gtctcttctt ccgccatgca atgaccttgc tcttaccatc atcccctctt ctgcatcagt 000720 000721 ttctctcttt ctactggatt attcagataa acatacaaat gtactgtgat atctcccacc cttaacaaac aaacaacacc 000800 000801 tttctcctac atatcctctt ccagttgctg cttcattttt ctgattctca ttgtggcaaa attccttgaa aaagttgtta 000880 000881 tatttgctgt cttcaccaac tcttccttca ttttctcttg actatattcc agtcaggctt tcctccccat ccttccacat 000960 000961 ccccctaact ccattgtcag gataatcaat gaactccaca ttgccaaatc cagtgaccag ctcttggttc tcattttact 001040 001041 tgacctatta gcattgtaca aatctgatcc ggccttcctc cttcttcttc atttttattt gttttttttt tttttttttt 001120 001121 gagtggtttt aggttcagaa caaacttaag aagaatgaac agagatgtcc cCCCTCCttc tttttttttt ttttgaagac 001200 001201 agagtctcac tctgttgctc aggctggagt gcaatggtgt gagccaccac accctggtcc tgcctggccc cgtcttcttc 001280 001281 tttaaagtct gcttcatcag tttctgagtc atccttccct ataggtactt caatctcagt gactacccct tctcaatctc 001360 001361 ctttgctggg tgctgcagct tcctgaattc tgaatgggag agtgcctagg gctccagcct cagacctcat cctttcttca 001440 001441 gccatatctc atttggtctg tggctttatg taccagctat gtgctaagtc ataaacatta aaattccagt atgggcccct 001520 001521 t |
Predicted Small Protein
Name | NONHSAT004581_smProtein_38:208 |
Length | 57 |
Molecular weight | 6042.8006 |
Aromaticity | 0.0714285714286 |
Instability index | 48.4357142857 |
Isoelectric point | 4.50115966797 |
Runs | 7 |
Runs residual | 0.0282982045277 |
Runs probability | 0.0344588285766 |
Amino acid sequence | MSIDFPLFMEDEGKTPNGINLFFSPSLSLSLLSLPTNQSVPGENVPSTAPLHQRLG |
Secondary structure | LLLLLLLLLLLLLLLLLLEEEEELLLLLEEELLLLLLLLLLLLLLLLLLLHHHLLL |
PRMN | - |
PiMo | - |