NONHSAT004675
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT004675 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1439 nt |
Genomic location |
chr1+:95975896..95981020 |
Exon number |
3 |
Exons |
95975896..95975918,95978076..95978178,95979707..95981020 |
Genome context |
|
Sequence |
000001 AGAAGCTGGA GGAAAAGCAG AAGATACATT AGTTTGCCAA GTATGCTGCT GGATGTTCAT TCAGCACTAG TGTTTAACAA 000080
000081 AAGCCCGGTT TTAAAATCAG AGGATATGAG TTGGGGGGGC CTTGAGGGCG CTGAACACTG ACTAAGAGGA GAGAGCGCAC 000160 000161 ATTACATGGA GACCATGGTC CCCATACCAG AAACATGAGA GTAGAGAGAA GCAAAGCCAG CATCGTGGAG CCAGTCCCTT 000240 000241 TATCCAGGAT CTTGGAGGGA TACAGTCTTC TGTAGAAATT AAATAAAGAC TGAATTCTTC AATGGGTATT TTGAGAAGAG 000320 000321 AGCCACTGTA AGCTTATACA CTGTGAATTG CAAAATGTTA CTGCCTCTGG GTGGACAGGT TTTAAAAAGA CTTTTTTTTT 000400 000401 TCCTCCTGGC ATGGCTGACA GAGGGAAGGC TGGGTTTCAA TCCCATCTTT CCCTTCCCTT GCCCAGTGCT TCTTTATGTG 000480 000481 CACAACCTGC ACAACTATAT GTGGTTTGCA AACACGCATA AGCAAAGACT AACAGCTTCT GAAACAAACT CTGAATAAAA 000560 000561 GAGGGAGCAT ATTAAGGCAG ATGGCAGAGG AGGTGAGCAG CATGGGCAGA TAGAAGCATC ACAGAGACTA CAAGAAGAAT 000640 000641 GTGCCAGACC GGCTCATAGT GGCCACACTG ATTAAGAATT ACCATCAGCT CTTTAGGATT TGGAAACTTG GAAACACATT 000720 000721 GTGTGTTCTT CCTGGTTTGT TATAGAGTAT GTGTATGTAC TTCTTTCTCT TAAAAATATT TATTTTTAAA GAATTGACTT 000800 000801 ATAAAATTAT ATGTATTTGT CATGTATAAC ACAATATTTT GAAGTACAGT CCTGTGTCAT AAGGATATGT TCTGAGAAAT 000880 000881 CCATCAATTT TGTCATTGTA TAAACATGAT AGAGTGTATT TACACAAACC TAGGTGGTAT AAACTACTAC ACACCTAGGC 000960 000961 TACATAATGT AGCCTATTGC TCCTAGGCTA TAAACCTGTA TAACATGCTA CTGTACTAAA TACTATAGAC AATAGTCACA 001040 001041 TACTGGTGAG TATTTGCGTA TCAAAACATA TCTAAATATA GAAAAGATGC AGTAAAAATA TGGTATTACA ATCTTATGAG 001120 001121 ACCACTATAG TATATGAGGT CCATCATTGA TTAAAACATA GTTATATGGT GCATGACTGT ATATATGCAT TGTGGAATGG 001200 001201 TTAAATCTAG CTAACTAACA AATGTGTTAT ATCACATAGT TATTATTTTT GAGGTGAGAA TACAATATTC ACTCTCTTAG 001280 001281 CATTTTTTAA GAATACAGTA TATTAACTAT AGTCACCATG CTGAATGGTA GATCTCTGGA ACTAATTTCT CCTATCTAAG 001360 001361 TGTGATTATG TACCCTTTGA CCAACATCTT TCTAACCCCA CCCCACAAAC ACCCCATAAT AAAGCCTCTT GTAACCACC |
Predicted Small Protein
Name | NONHSAT004675_smProtein_410:520 |
Length | 37 |
Molecular weight | 3796.4028 |
Aromaticity | 0.0555555555556 |
Instability index | 42.9361111111 |
Isoelectric point | 8.84283447266 |
Runs | 8 |
Runs residual | 0.0417637917638 |
Runs probability | 0.0363120473414 |
Amino acid sequence | MADRGKAGFQSHLSLPLPSASLCAQPAQLYVVCKHA |
Secondary structure | LLLLLLLLHHHHLLLLLLLHHHLLLHHHHEEELLLL |
PRMN | - |
PiMo | - |