NONHSAT004802

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Basic Information

Transcript ID

NONHSAT004802

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2386 nt

Genomic location

chr1+:101121800..101171670

Exon number

2

Exons

101121800..101122360,101169841..101171670

Genome context

Sequence
000001 GGAGATGTTA ACCCTAGACA GGGAGGAATA TTGAAATGGG AGGAAAAGAG GATTGAAAGA AAAGGTAAAT GTGTAAGTTT 000080
000081 AGTGGCAAGA AATAGAAAAA ATTTCACAAG TGGTAAGGGA GAAATGGCCT GGAAGCAGAA GTAGGGAGTA AAGAAGATCA 000160
000161 TGACCTAACC TTTTGATCCA AAGGTTTTAT ATGGAATGTG GGGAAAAGAG CAGCTTTCAC TTGAGACATG GCTGCTGAGT 000240
000241 GTTTCTGGGG GAGCCAGGTT TCAATCAAGT CAAGGAGGGA AGGCTCAATG AAGAGGTCCA GGCTGTAGGG GGCTGGATCA 000320
000321 TGGGATGAGA GTTACAGAGG GCTCAGAGTG AAGATCTGGA AGGGAGGAGA GGAATGGGGA TTGGGTTGAG AAGGAAGAGA 000400
000401 ACGGGATACC AGTTGGGCTT AGGTCTTGGG TGGGGATCAA GGATAACAAG GTTTTTTCTA CTGTGTTTGG AGAGTTTCCC 000480
000481 TGGCTGAGAG TACACCAAGA AGTTGATCTC CTGGTTGGGG GAGTAGCACC TGACAATTCA ATATGTGGAT CCTTCTTGGA 000560
000561 AGTAACAGAG CATGCTGGCC AAAGAGTTAC TGCAAAAATG CTCCTAAATC AAGTAAACAA GGAAAAGAAC AGGAGCTGAT 000640
000641 AATGCTGTTG TTTGTTAATG CTCTTATTGT AAACTACTTT TTGGAAGATA AACCTTTTGT GGGAAGGCCA GGTACTAGGC 000720
000721 TCCTTCATTG CCTTAGATGA TCCAAGAGAC TGAGTAATCA AGATGGAGCA AAGAGCAAGA AGAGTGTCTG CAACACTTTT 000800
000801 AACTTCACAA AGAAGTTACC AGGCAGAAGG GGACAATTGC AGTGACTGAT TTTCCTGACA AAATGACAGT GTCTTGACAA 000880
000881 TGGCTATGAA GTCTTGATGA CCCTTAACAT CTCATAGAAC AAAGAAGTCA GTAGAGCAAG GTGAAAATGT TAAAGGAGGA 000960
000961 ATACAAGAAA CACAAAAGAA AGATGACAGG GTGACAAGTT AAACATAATC CACGGAATAA GAAACGTCAG AAGCCTCCTC 001040
001041 CGCAGTACAC CTACAAACAC CTGCCCTTTT GTTAATAGAT AAAAGAGAGC CTCTCACTGT AACTCCTTAA CTTCCTTGGT 001120
001121 GGAGGGAAAT CAGATGGCTA GAAAGTGTGG TGGTGCCTGG TGTGAAAGAC TTAACTGGGC AACACATCCA GCAAGCTGTA 001200
001201 TTTAACCTTC ATCAGTCTTT TATTTGTACC CCCTAAATCC TGGTTATTGA AGTCTTCCAA CTCCACCTCA TCTCTCCTTT 001280
001281 TATTGTCCCA CTCATAAAAT CTCATAGGAG TAAATAGATT AGACATATTT ACTGATTAGG GCAGACATAT TCCTCATATG 001360
001361 TACTGAGGAA GAGTGATAGG GGGATCACCT TGGCCTGAAA CCCTCTATCA GGAGCCAATT TTCAAGAAGA TAAGAAAATA 001440
001441 ATCAGCCACT TGTGATCTTC TTTCCTTAAT TATATGAGAT CCTATCCAAA TTTTCAATCC ACTGTCACTG ACCTCTGAGG 001520
001521 ACCTTTGATG CCTTTGACCT GGCTCTAGTG GAGTACCTTC CATTCTTCCA AATAGTCCCC CCATTTGCCT TGGCCTTAAA 001600
001601 TTCCACCATG AAGGGGGAGT CTTTTATTTT AAGCATTTCT TTTTATCTAA TAATAAAAGA TAGAGGAAAT AAGATAGTGG 001680
001681 GATTCGAAAT AACGTAACAC AAATTAATTA TTCATATCAG TTTCTCTACT AGAGGAAATG CAATAGTTGA TTAAGGATCA 001760
001761 GAGGAAGGAA AATCCTTCAA TGAAACATTG AAAGAAAGCT GAAGAATTTG TAGTGAGAGA AAACAATTAT CTTAACAAAC 001840
001841 ATTTTTATAT TATAATTCTT TTTCCCTTCT GGACATCAGA TGCAGATAAT TGAGTTCGTG ATTCAATTCG TGGGTCATTA 001920
001921 TCATCACTGG CCGCAGCAAG GCTTTATTTG TAAAAATTTT TTTCCATTTT ATTTCCGTTC CTCATTCCCA TTCCACCTCC 002000
002001 CCACAGGTAG CTCTTCTAAT ATATTAAATG TGTACCTTTT TGTTTGCATG TGTTCTTGCA AAATGCATAT TTTTGTGTAC 002080
002081 ATCAAATTTA CATAAATAAT ATCACATCAT AAAATTCAAT CCATTTTAGA TTTTATTTTC CTTGGACCAT ATTTTAAGAG 002160
002161 CCATGCATGT TGCTGTGTGT ACATATAATC CCTTGCCTCT AACCACTACA CAATGTGCAC ATTTTCCCTA CATACTCTCC 002240
002241 CAGTGATGTT GACCAATATT ACCTCCAGTT ATCGCACCCC AAATGATGCT GAAACCAATA TACATGTACA TGACCCTTAT 002320
002321 GGAACTGTGT GAGAATTACT TTGAACTCTA TGTGCAAGAG CAAAATTGCT GTTAATAAAG TTAAAA
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Predicted Small Protein

Name NONHSAT004802_smProtein_542:739
Length 66
Molecular weight 7523.8923
Aromaticity 0.107692307692
Instability index 45.8261538462
Isoelectric point 9.66265869141
Runs 9
Runs residual 0.0118269230769
Runs probability 0.037390331508
Amino acid sequence MWILLGSNRACWPKSYCKNAPKSSKQGKEQELIMLLFVNALIVNYFLEDKPFVGRPGTRL
LHCLR
Secondary structure LEEEELLLLLLLLHHHHLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLEE
EEELL
PRMN -
PiMo -