NONHSAT004832
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT004832 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
819 nt |
Genomic location |
chr1+:101529170..101552744 |
Exon number |
4 |
Exons |
101529170..101529195,101549017..101549130,101550608..101550949,101552408..101552744 |
Genome context |
|
Sequence |
000001 CACCTAATAA GAGTAAAGGC AAAGAGCCTC TCAAGCACTG TGAAAAATCA CTTTCTCTTG TTGTATTCTT GGAGCCCCTG 000080
000081 CTAATTCATT ATTGAAAAAT ACCTGCTGCC TGCATTTGGC CTTATGTTGT CATTTACTTG ggtctgtgca tggcgtttag 000160 000161 aaggctacac cttaggctgg gggtcaagaa tgtcttccct gatgtgaggt ttacacagag atctgaagaa tgaagagtcc 000240 000241 agctaagtta agtgggagcg gattaaggga atgcaaggac atgaaagagt gtcctaggca gagggaacaa catatacaaa 000320 000321 ggccctgagg tgggagtgaa caaggaactg agagaagaac tgagagaagg ccactgtggA AAGCCAGATG CTGTGTGACA 000400 000401 TGAATAATGG GACACAGGAA ATTGAGATAT TAGCAAAAGA GAGATTGATG ACCCATAGGC TTGAAGATGT ACTGGAACTA 000480 000481 AAGTACTTCC TAAGCGTGGC TACTCCAATG AAGCTTTAGT ATATGTACTG AAAGAAGATC CTCTCATACT GCCACAGCCA 000560 000561 AGAGATAAGG TTGTAAATCT TTATTGGGAG AAGCCGTCAA GGACAGTTCT GTGAAATGAA AGGATCTCTG GATCACCACA 000640 000641 AAGTCTGGCT CAGTGACTAT GGCTTTGCAA ACACTAAACA TTCCTGTCTC AAGTCCTGTA GATGGCTTGA AATAGTATAC 000720 000721 ATAAGCATGC CTTATAAACA TCTTCAGTCT TTATCAACTC TTTGGAGATT CAGCCATTCT TTTTTGTACT TTAGGGAATT 000800 000801 AAATCATTTT ATAATGTAT |
Predicted Small Protein
Name | NONHSAT004832_smProtein_149:232 |
Length | 28 |
Molecular weight | 3302.8114 |
Aromaticity | 0.111111111111 |
Instability index | 78.5111111111 |
Isoelectric point | 11.4176635742 |
Runs | 5 |
Runs residual | 0.0214707461084 |
Runs probability | 0.0409291644586 |
Amino acid sequence | MAFRRLHLRLGVKNVFPDVRFTQRSEE |
Secondary structure | LHHHHHHHHLLLLLLLLLLLEEELLLL |
PRMN | - |
PiMo | - |