NONHSAT004965
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT004965 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
549 nt |
Genomic location |
chr1-:108138917..108216271 |
Exon number |
7 |
Exons |
108138917..108138963,108145019..108145106,108145669..108145785,108152553..108152587,108160189..108160254,108185241..108185377,108216213..108216271 |
Genome context |
|
Sequence |
000001 GTACAAGAAT GAACAAGATG TGTTTTCCCT CACACAACTC CCTATGTCCT GGAGCAAAGG TTTACCAAAG ATGCAGGTCA 000080
000081 TTAGGAACTA TTCTGGAACA CCACCCCCAG CTCTGCATGA AGGACCCCCT TTACAGCTCC AGGCCGGGGA TACCGTTGAA 000160 000161 CTTCTGAAAG GAGATGCACA CAGTCTGTTT TGGCAGGGCA GAAATTTAGC ATCTGGAGAG GTTGGATTTT TTCCAAGTGA 000240 000241 TGCAGTCAAG CCTTGCCCAT GTGTGCCCAA ACCAGTAGAT TATTCTTGCC AACCCTGGTA TGCTGGAGCA ATGGAAAGAT 000320 000321 TGCAAGCAGA GACCGAACTT ATTAATAGGG TAAATAGTAC TTACCTTGTG AGGCACAGGA CCAAAGAGTC AGGAGAATAT 000400 000401 GCAATTAGCA TTAAGTACAA TAATGAAGCA AAGCACATCA AGATTTTAAC AAGAGATGGC TTTTTTCACA TTGCAGAAAA 000480 000481 TAGAAAATTT AAAAGTTTAA TGGAACTTGT GGAGTACTAC AAGCATCATT CTCTCAAGGA AGGGTTCAG |
Predicted Small Protein
Name | NONHSAT004965_smProtein_8:166 |
Length | 53 |
Molecular weight | 5917.9336 |
Aromaticity | 0.0769230769231 |
Instability index | 56.1057692308 |
Isoelectric point | 9.16253662109 |
Runs | 6 |
Runs residual | 0.0349847892221 |
Runs probability | 0.0305452511336 |
Amino acid sequence | MNKMCFPSHNSLCPGAKVYQRCRSLGTILEHHPQLCMKDPLYSSRPGIPLNF |
Secondary structure | LLLLLLLLLLLLLLLLLEEHHHHHHLHHHHHLLLLLLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |