NONHSAT005025
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT005025 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1046 nt |
Genomic location |
chr1-:109822179..109825747 |
Exon number |
2 |
Exons |
109822179..109822778,109825302..109825747 |
Genome context |
|
Sequence |
000001 GGGAGAAAGC CTGTTGCGTG GAAGATAAGG CGGCGCGGGA AGTGGACACA GGGTGGGCTG GAGGTGTGCT TCGCGTGTGA 000080
000081 TGCCAGGGGA GTGGAAAGGT GGCTTGGGGA GTGCAGAACC CTGAGGATAG TGGCGGGGAG GAAGATGGGG CGTGCAGGCC 000160 000161 GCCCCCAGTG AGGAGAGGCC AGGATGCAGG GCGGCTCCAG GGCAATCTGG GCAGTTGGGG GAGCCCTCCG TATCGTTCCC 000240 000241 GGAGGTAGCA GGAGTAGCTG TGCGGGAGGT GCCACTCCTG GGCGCTTGCT TTGCCTCCAG CATGACCCCC GACCCTGGCT 000320 000321 TGCACCCTGA ATCTAGCTGC GAGCCTTGGG CAGAATGGAT ACCTGAGGAA AGGTATGGTT TCTCTCCGGC TCAGATCTAA 000400 000401 CTGGACTCTC GCTCCTGCTG GCTGGACATG GAGGATTTgg aggaagGTAA AGAGATCAGG ACAGCAAGCA AGACTTCAGT 000480 000481 AGCAAACCAC TACAGTCAGT ACCTGGACTC GCCTCTACCC AGCAGACCCT GACTCCAGCA GATTCTGGCC CAGGGACAGG 000560 000561 AGGAAGAGAT GCCACCAGGG CTGGTCTCCC AGGAGTAGAG ACCATGGGAA ATGGGGTGGA TTAGGATTGA GCTGGAGAAG 000640 000641 ACTTAAACTC TCTGGGTTGA AAGAAGATTA GGGGAAAAGA GGTCACCTTC CAGCAGTGAA ATGAACAAAT AGAAGATGAG 000720 000721 AAGTACAGGC AAGTGGTTTG TCTTTATCCA CCCCCACTGT TGTGGTCAGC CCCAGAGAAT TTTATCTTCT TCCTTGGCAT 000800 000801 TGGTTCACTG GACATTTCCA CGTGAGCGGC CTCCGTAGCT AACCTCCCTG CCCTCTGAGG AGCCATCTTC CTGAATCGCA 000880 000881 TTCTCTACTG GACTCTGGCC TGCTTGGAGA GGTGGCAGCA GGCACCTGGT CTTCAGAAAT TGTTTCCTGT GAATTCTGTG 000960 000961 ACTCCTAATA GGCCAGTTTG TGATAAGCTT ACTCTATGAG TCTTCATTTT TCTAAAATAA AGTGAATGTA TTTTTATATT 001040 001041 CTCTGT |
Predicted Small Protein
Name | NONHSAT005025_smProtein_374:481 |
Length | 36 |
Molecular weight | 4237.9411 |
Aromaticity | 0.114285714286 |
Instability index | 65.3971428571 |
Isoelectric point | 12.7009887695 |
Runs | 7 |
Runs residual | 0.0188861985472 |
Runs probability | 0.0394049511698 |
Amino acid sequence | MVSLRLRSNWTLAPAGWTWRIWRKVKRSGQQARLQ |
Secondary structure | LEEEEELLLEEELLLLLHHHHHHHHHHHHHHLLLL |
PRMN | - |
PiMo | - |