NONHSAT005140
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT005140 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
580 nt |
Genomic location |
chr1-:111146618..111148986 |
Exon number |
3 |
Exons |
111146618..111146728,111148013..111148344,111148850..111148986 |
Genome context |
|
Sequence |
000001 GCGTTTATTC TGTGCTCCCT GCCGAGGAGA TGTGAGGGAT TTTCTCTTGG GGGAGAAATC AGTGGTCGAG CGCCTGCCCA 000080
000081 GCTCAAATGC CACCCGGCTC AGAGGGAGGC CTGCGGCCCA GGGATCCCGG AGGGAGAGCA ACGTCACACC TCCTGAGGAC 000160 000161 AGCCAGGACT CCAGCTTTTG CTGAGCTTTG CATCTTGCCT CCTTCCTTCA AAAGGCTCCA GGCCCATGCT CGGCTGTCTT 000240 000241 CAAGTCCCGC ATGCCCCTGG CCAGGCACCT CACCGCCCCT CCAGCCCAGC CCAATCCTAG AGCTCACCTC CAGGACCCAG 000320 000321 AGTCTGCCCT TCTGCCCAGA ATGACTCACC ATTATTTCTA GCTCGAGTGA GAAGACGTGA TGAGGAGTTG GGCTGCCTGT 000400 000401 TGGTGCATCT CAGATTCCTG CAGCATCTGA TCAGCTCTGC AAGGAAGAGA GCTTCACGTC TCTGGTCAGA GACACTCTGC 000480 000481 ATCATCTGGT TCTCCTTTGA ATTCTTGGTG AGGTTCTTTG CCTGTCCCAG CAAAGCCGGC TTCTTCACCA ACATCATGAA 000560 000561 CATCATTGAC ATTGTGGCCA |
Predicted Small Protein
Name | NONHSAT005140_smProtein_86:343 |
Length | 86 |
Molecular weight | 9096.3803 |
Aromaticity | 0.0470588235294 |
Instability index | 101.323529412 |
Isoelectric point | 9.78338623047 |
Runs | 10 |
Runs residual | 0.0188948306595 |
Runs probability | 0.0496202084438 |
Amino acid sequence | MPPGSEGGLRPRDPGGRATSHLLRTARTPAFAELCILPPSFKRLQAHARLSSSPACPWPG TSPPLQPSPILELTSRTQSLPFCPE |
Secondary structure | LLLLLLLLLLLLLLLLLLLHHHHHHLLLHHHHHEEELLLLHHHHHHHHLLLLLLLLLLLL LLLLLLLLLEEEEELLLLLLLLLLL |
PRMN | - |
PiMo | - |