NONHSAT005140

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT005140

Source

NONCODE4.0

Same with

,

Classification

sense

Length

580 nt

Genomic location

chr1-:111146618..111148986

Exon number

3

Exons

111146618..111146728,111148013..111148344,111148850..111148986

Genome context

Sequence
000001 GCGTTTATTC TGTGCTCCCT GCCGAGGAGA TGTGAGGGAT TTTCTCTTGG GGGAGAAATC AGTGGTCGAG CGCCTGCCCA 000080
000081 GCTCAAATGC CACCCGGCTC AGAGGGAGGC CTGCGGCCCA GGGATCCCGG AGGGAGAGCA ACGTCACACC TCCTGAGGAC 000160
000161 AGCCAGGACT CCAGCTTTTG CTGAGCTTTG CATCTTGCCT CCTTCCTTCA AAAGGCTCCA GGCCCATGCT CGGCTGTCTT 000240
000241 CAAGTCCCGC ATGCCCCTGG CCAGGCACCT CACCGCCCCT CCAGCCCAGC CCAATCCTAG AGCTCACCTC CAGGACCCAG 000320
000321 AGTCTGCCCT TCTGCCCAGA ATGACTCACC ATTATTTCTA GCTCGAGTGA GAAGACGTGA TGAGGAGTTG GGCTGCCTGT 000400
000401 TGGTGCATCT CAGATTCCTG CAGCATCTGA TCAGCTCTGC AAGGAAGAGA GCTTCACGTC TCTGGTCAGA GACACTCTGC 000480
000481 ATCATCTGGT TCTCCTTTGA ATTCTTGGTG AGGTTCTTTG CCTGTCCCAG CAAAGCCGGC TTCTTCACCA ACATCATGAA 000560
000561 CATCATTGAC ATTGTGGCCA
[back to top]

Predicted Small Protein

Name NONHSAT005140_smProtein_86:343
Length 86
Molecular weight 9096.3803
Aromaticity 0.0470588235294
Instability index 101.323529412
Isoelectric point 9.78338623047
Runs 10
Runs residual 0.0188948306595
Runs probability 0.0496202084438
Amino acid sequence MPPGSEGGLRPRDPGGRATSHLLRTARTPAFAELCILPPSFKRLQAHARLSSSPACPWPG
TSPPLQPSPILELTSRTQSLPFCPE
Secondary structure LLLLLLLLLLLLLLLLLLLHHHHHHLLLHHHHHEEELLLLHHHHHHHHLLLLLLLLLLLL
LLLLLLLLLEEEEELLLLLLLLLLL
PRMN -
PiMo -