NONHSAT005146

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT005146

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

3053 nt

Genomic location

chr1+:111220024..111224633

Exon number

2

Exons

111220024..111220566,111222124..111224633

Genome context

Sequence
000001 attctagccc tgttggacag ccgaacccat cacaacaaat caatgccaaa aatggcattT CAAGAGGAAA ACATAGcatt 000080
000081 tatttagtac ccccaacaga gtagctcaaa gtgatttgaa aatgtctcat taatcctcat aacacccctg tgggataata 000160
000161 ataatattat tatAACGTTT AGGCGTAGAA CTGTGGCAAA GCCAACAGCT TCTCTGAGCA TGTGCAGGAT TTCCTCATAT 000240
000241 TTCAGTCTGC AATACTAGAG CCTGACTAAA ACCGTCAGGT TTGCAAACAG CAAGGGTAAA TAAATCTTGG TGTTTGGCCT 000320
000321 TTCTGTGTTG CTCTAGGCAT AGTTTGTGTT TCCTACTGAC CACATCAATC CCAGAAATAG TTCACCAGTT GTTTGCCAGA 000400
000401 TGGTAAGCAG CATTTAGGAT TAGCTCAGAA GTGTTTGAGA GTGGGACAAG GCAGGGCTAG AGGTCCTGAT CCACAATTAC 000480
000481 AGATAAATGA ATGGAGAAAT AGCAcctagt aacagtgtaa aagcgttcct atttctccac atcaaagtat aataataata 000560
000561 gaaaaaAgag cacctagtat gtgcacagca ttgttctaga tactgtgggg atatgaagtt taaacataga tcatgccctc 000640
000641 attgggctta catgctgttg aaaagatagg atataaatcc atgaaaattt ttacaatgct atttattaac aatacatgac 000720
000721 aagagtacta gaaatgttac tTGTGACTAT TTTGtctatt ctagccaagc tggatgcctg gctgtttctc agttatacta 000800
000801 aatgagttct gctctcaggg tcttcatact tgcccttccc tctgcctgca acactcttcc tccagttttt tttttttttt 000880
000881 tttggctctc tccatcactt taggtctcca ttaaaactgt cagcttcagg gaagttgcct tccctgacca caaccacact 000960
000961 aattcaaata gcaatccttc cccgcctccg tttggtaact ctctagtctc ttatctcctt tatttttctt catttcgttt 001040
001041 atttacttga cattatattt tatatttatt ttgttacttt cttattgtct gtcacctgca ctaaaaaata aactccttga 001120
001121 aggcagggtt tgggcttttt gacttctgta tgctccagat ctggaagagt accaggcaca tcgtagatgc ttaatGGAAG 001200
001201 AAAGAAAAGG TACAGAATGA ACATACAGAC ATGTGACAGT ACTCTCTCTC tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg 001280
001281 CCAAGTGTTT ATTTTGAAGA CGTATCTGTC TAGTTCTGGT TCATAGAACC AGTTAGGCTA TACACATATA TATACAAGGA 001360
001361 TTGTTTTTTA AGTGCCACTT CTTCCCTTTT TTTTTCACCT TCCCTTCCCA CCATCCTGAA GGGGtctgtc ctgcactcca 001440
001441 gaattatact ttaaactccc ccacttgata ttcttcctga agttccccaa acttaatatt tataacactg acctcattat 001520
001521 cttctccccc aaacttgctt ctcttcctgt tttttttttt tttttttttt tttgtgctag aatacggagt catccctgca 001600
001601 tccttcctct gctctcacat ctattcagtc actaagtgct ttccattccc cctccaagcc cttctcaatt ctgtccatac 001680
001681 ctctccattc tcactgccac tgtcccagtt caggctgcca tgacagtttc ataacaggct ccctgcttgc agtctctctt 001760
001761 ttatgtgttt tatcctccag gatatagctg agttattttt gtaaaacata ggttggatca cattgctctc cactgctGCC 001840
001841 ATGATGGCCA AACCCTGGCT CTGACCTGTC ATTCTGGCCG CATCTccaca ctacttgctg gtccttggac aggtcatcca 001920
001921 cttacacact gctgagccat tgctcatgct agctgcttat gctctagctt gctggatact cctttcacct ttttccactg 002000
002001 gtgaattcaa tcttcaagtc ccagcttagg gaccacttct tttaagagcc ccacctTCTT GTCAGTCATA ATTACCACTT 002080
002081 CAAAGAAGAT TCCATGTAAC TGATAAATGA ATTCAGTGAT ACTCTTTctc atcagagctc ttacggtatt ttgtttaaag 002160
002161 ccccattaga gggctttatt gtactatatt taggtgtgtt tgatatgatc tgtctcccta tgagaatgtg aactccATAA 002240
002241 TACtaatagc taacatattg agcagtgaat acactatgct aagtcaggca tggtgctaac cactttatat gcagtaacct 002320
002321 ccaacagccc tgtaaggcag ataatattac tactgtaata gcagtagtaa tatttcacag ataaagaaac tgaatgcagg 002400
002401 gtggtgaatt cacttgtgca aggttatata actagaaaat ggtagaacta ggattcaaac caagAAGTTC ACATCCTTAA 002480
002481 GCCCTactgt aggctacctc tgtggtgatt agaggcctta tcttattcat ctttgtattt ccagtctctg gtaTTGTGTT 002560
002561 GCTATATGAT AAATGCTTTT CATATAGTAT AACAGAAGAA AAATGATTAC GAAGCATACT AGCTATTTGC TAAAAAACTG 002640
002641 ATAGACCATG ATGAAAGAAT TAGTCGTGTT CCTCAATGCA AGGGCTATAC ATGGGCTTTC CTGAATCTGT ACCATTTTTT 002720
002721 TTAAGAAGTA AGAAAGATGC AAGGTATAAA GAGAAAGTTA TTCCAGAAGT AGATGCAGAT ATAGGTCCTG ACTGGGACTA 002800
002801 ACATGGCTCT CCAGTGTTGC CGTATCCTCA GAAAGACCCA GCAGTCTAAG TCCTTGTTCT CACATGGCAG AGTGATTTTG 002880
002881 AGAAAAACAT TTCTAAgccg agcgcattgg ctcatgcctg taatcccaga actttgggaa gccaaggcag gcagatcact 002960
002961 tgaggacagg agtttgagac cagcctggcc aacataggga agtcctgtat ccatgaaaaa tacaaaaaat tagctgggcg 003040
003041 tggtggtgcg tgc
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Predicted Small Protein

Name NONHSAT005146_smProtein_773:913
Length 47
Molecular weight 5068.8878
Aromaticity 0.152173913043
Instability index 58.2782608696
Isoelectric point 6.20233154297
Runs 8
Runs residual 0.0125517598344
Runs probability 0.0322270800213
Amino acid sequence MPGCFSVILNEFCSQGLHTCPSLCLQHSSSSFFFFFLALSITLGLH
Secondary structure LLLEEEEEHHHHHHLLLLLLLLLLEELLLHHHHHHHHHHHHHHLLL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLL
PiMo oooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTTii