NONHSAT005167

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT005167

Source

NONCODE4.0

Same with

,

Classification

sense

Length

5300 nt

Genomic location

chr1+:111720836..111727722

Exon number

4

Exons

111720836..111724940,111725421..111725579,111726084..111726209,111726813..111727722

Genome context

Sequence
000001 GGAAATTGCC TTCCAAATCC TCATTAAGTT AGAAGGCTTT TACTGACATT TAGAAAGCAA GTTTATGGTC AGAACAAATA 000080
000081 AAAACAGTGC AGATGTCTTC ATAAGGCTGA TTCCAGAAGA TCAGCTGTTT TGTAAAGGTA AGTGATTTGC ATCTATTACA 000160
000161 TATGGATTAC CCATTCTTTC CCAAATTTTT TCCCCAAAGA GATGAATTTT TACCAAAGAT TATAGTTATT GTTGTTGTTG 000240
000241 TGGTTTTCCT TTTTTTTTTT TCCAAAGGAA AGCAGTTGTC TTCATGCATA AAAGTCAGTG CTTGTTTTAT ACATTGCAAG 000320
000321 AAACAAAAAG CATATTTTTT GTTTGTTGCT TCCCCAAAAG ACATTCCTTT TAGAATGCCT TGGAACTATG TTCTATCATA 000400
000401 TCACTCTTTA AAAAAAACAA AGAAGAATAT ATTCTTATTT GGAAGAGACT TAATATAATC AACTCATGGT TACTTTTACT 000480
000481 GATGCTTGAG TCTTTTAAAT GTAGTAATTG ATCAAATTGT ATTAAGCCAT AAGGGACTTT CTGGAATTCA GTTAAGGCAA 000560
000561 CTAGGTGAGT GTTACTACTG CAGGTGAGGT TTCAGGATTC ATTTGGTCAG ACTGAAGACG TTCTATGTAG TATAAATTGA 000640
000641 TTATATCTCA TTCTTGAACT ACAAGACTTT AAAATGCCTT TACACTTAAA TAATTCTGAT AGGGTGATTT TCCTTTGTAG 000720
000721 ACACTGTAAT TATGTTAACA TTTGCTGTAT TTTGGTGGAA TTCATTTACA TTAAAATGAT TTACAAACAG GCATTCCCAC 000800
000801 ATTCTTTGGA GGAAAGTGTC TAATCTCAAA ATGGTACTTT TTATTTCTGC TCTGATGTAC AAAGCCTGTA AGGACATTTT 000880
000881 ATCATGCTTA TAAGAAAACT AGTCAAAATT TACTAACTGA TATTAGTCTG CATTAATACA AACTATTGAA CCAAAAAACA 000960
000961 TGACCTTTGT AATCTGGTAA AGATACTGAT AATTTAAGAT TTTCTTTTTC TATGTCTAAC CTTTTTAAAA GTGAATTTCA 001040
001041 TTACATTGTT ATTATTTGGA TGCATACCTT CATGGTATGA GTCTGGAGAG TTTTCACCTG GCTGTAGGAC AGACACCATG 001120
001121 GTCCAAAGGA ATTCTTACTC TTCCCAACTC TTAAAGACTT GAAACTTCAA GCAGACCTGA CATAAAGATG TCTTTGGTAT 001200
001201 AGCTCTTTGG CTATTTCTAA AGAGTGGATG CACTTTGGCC ACCTTTGATA AGTTCCAAGA TGATGACAGA AAGAAAAAGA 001280
001281 TTGGGAAAGA CAGAATGTGC CTGTTCTTTT TGACTTGAGG GAGAGAGAGA ATGTGCCACC CTCCTTGATC TTAAGCGTGG 001360
001361 GGTGAGAATG GCAACACTTT GTGTTTTTTA TAAGTAGTGC CAATTTTTAA AGGATCACCT GGTGAGACTT GGGATTCCTT 001440
001441 TGACTCGAGC TTTTCCTTCA CTTTGCCTCA TATTTTCTTG GTAGCTCACT TTCTTTTTCA TTGCTAATGT GGGGGCTAGA 001520
001521 TGTTTCTTCA TACTCTCCCA AAACAGGAGT TCTACATAGA AAGGAAGAGA AAGGGAGATT TTAATCttca tttaacaaat 001600
001601 gtgtattgag ccacctacaa taaccagggc tctagagagt gtacaaaatc aattcaaaca aaatccaaca ctcaggagct 001680
001681 tatgttttgg tgTATATAGC TAACATATAT GACAAAAGTG ATGAAAACCT TAAGAATCTA TGATACTTTG CGCCTAGGTC 001760
001761 AATAGCTTGC TTCCTTACTT TGTGGTCCAA GCCATGTACT AATTTTCCTG GCTTTTCTAA TGTTTGTGTT TATTCTTCTT 001840
001841 TCAAAGGGCA ACAATTTTTA TGATCCCAAA GCAATTTCAC CAAATTTTAA ATACAGTTAT GACTCTCATT CAGTTCATTT 001920
001921 ATGACACAGA TGACTATTAT ACAGAGATGG TACTCATTTA GTACCCTGGC CCTAATACAG GGCTGTCCCT GTAATAGAAT 002000
002001 AATGCTTTGC TTCTTTTGGA ATCTGAGGGA AGTATAGTAT TTTCCCTTTT GCCAGAGAGA TCTTTTGTCT CTATGGAGTC 002080
002081 AAAAGTGGGA GGGGTGGGAA GAGAGGTTGG GAACCAGGAA ACTAGCCACA GTATTGAGTT TCAGCCAGGT GCATCAGATT 002160
002161 GAGAATGTAA TGTCCCTAGT TTATTGAACA AGAGCAGAAA AATCTCTTGG AGTTCAAAGC AACCATGGTG TTGATTTTCT 002240
002241 CCTTTCTTGA AAACAAGTTT TGAACTTAGA CTGTAGAGGT TGGAGATTTA GGGGGAGAAG ATAACCATTT AGGATAATCC 002320
002321 ATAAAGTTTA GGACTTGACT TAGTTGACCT AGTTAATTTT AGAACTAGGT TGACCTAGTT AATTTTAGAA AATTTAACAC 002400
002401 TGCTACAGTA CAATTTAAAC TTGAACATTT GATTTCAATT TTTTTTAGAG CTGCATTTTT GCAAGAGGTA ACAGAGTTAT 002480
002481 CTCAACAAAG TGAGTTCTTG AGAGTTTTGA AGAAATAAAG TATCCAACCA TTAAGATTTA TGTCTTCCAG TCTTAACTGA 002560
002561 GGTTTTCTAT ATAGTAGGAA GTGCCACATT TGCTATTTGA TTTTAAAAGT GTAGATAGAT GTTAGCCATA CAAAGTGTAA 002640
002641 ACAGCCCTAA TTAAAATGCT TTCATTGTga ccgggcatgg tggctcacac ctgtaatccc agcactttgg gaggctgagg 002720
002721 ctggcagatc acttgacgtc aagagttcga gaccagcccg gccaacatgg tgaaacccca tctctactaa aaatacaaaa 002800
002801 attagctggg cgcagtggca catgcctgta atcccagcta ctcaaaaggc tgaggcagta gaatcacttc aacccgggaa 002880
002881 gcgggggttg cagtaaacca ggatcacacc gctgtactcc agcctgggtg acagagcaag actctgtctc aattaaaaaa 002960
002961 aaaaTTTTTT TTTTCATTGT AAGAACTCAT GGCTTATTAA ACCACTGGGG GCTTTTGGAA TCTTGTTTCT ATAATCATTT 003040
003041 GTTTCTATTA CTAGACTACG TCATTTATTT TACTGTTGCT TTCTTTTCAA TCCATATTGG ACAAAATTTG AGACCAAAAT 003120
003121 TTAAAGGGAG GGGTGCGAAA AAGAAGAGAC TCTTAAATGA TTTTTAAAAT TCAGTACAAG TGTATTTCAT TTTAAATGAT 003200
003201 AGATATTGTG TTTGCAAAAA TGCATGACAT CAATCCACTC TGTCCCCCAT ACTTCAGGTA AATAAACACA TTTTCAGTAT 003280
003281 ACTTTATGAA TATATTATTC ACTTTTCTGA AAAGTACATT TAAACTTCAA AATTTTGTAT GCACAATAGT AGAATCTGTT 003360
003361 TGAATGTACT TGACCTGTTT TTTCTTCTGC ATTGTGAATG CCTTCTTAAT TGCCTTCTGC TTTTACTAGC TGCCTGTATC 003440
003441 CTAACAATTT GGAGTTGGGA ACTCTTCTGA ATAGAAATTT TATCTTCCAT TCTCTATACT CTGCAGATTT TTATATCTAG 003520
003521 TCGCAACATT TCTATTATGA TTCATACTTC CTCACAACAA TTATGAATGT TCTACAGATT TAGAGGTAGA ATTCAAAAAC 003600
003601 ATATACAAGG AAAAAGGCAG GGTGCACTCC TTTTATTAAA AGGCCAGAAC ACATCCTGGT TCACTGTTGC AAGACCACTG 003680
003681 GGATGCATTA GGTGAATCTA ACTTAGCTTG TGACACAAGT TAATAAAGTT GAATCTGGTT TTTTTGTTTT TTTTAAGGTT 003760
003761 GATGGCTGAA GTGAGATTAA TTTCTAAATA GTCTCAACTC TTGAGACTTG CTATATTGCT TATAATGAAG AGGAAAAGGA 003840
003841 CACTTTCATT ACTTTACGTA TTTATGTAAT TGGAGGGAAT GGAAAGTTTT TGGGAATATG AATCAAATAT TAGACTGTTT 003920
003921 TCTTATTTTA GTTTGTATAT GTTTTAATTG TTTTCTCTCT CTACCCATTA AAGATTCCAG TGCTGAATAT TCAAATGAAA 004000
004001 ATTTTTCCTG CACTTTGTAC TGTAGCAGGG ACCATATTTT CCTGTACAAA TTACTTCCGT GTAATCTTCA CAGGTGGTGT 004080
004081 TGGCAAAAAT GGATCAACAA TAGCAGGAAC AAGTGTCCTT TCTCCTTTTC TCCATATTGG ATCAGTGATT ACATTAGCTG 004160
004161 CAATGATCTA CAAGAAATCT GCAGTTCAGC TTTTTGAAAA GCATCCCTGT CTTTATATAC TGACATTTGG TTTTGTGTCT 004240
004241 GCTAAAATCA CTAATAAGCT TGTGGTTGCA CACATGACGA AAAGTGAAAT GCATTTGCAT GACACAGCAT TCATAGGTCC 004320
004321 GGCACTTTTG TTTCTGGACC AGTATTTTAA CAGCTTTATT GATGAATATA TTGTACTTTG GATTGCCCTG GTTTTCTCTT 004400
004401 TCTTTGATTT GATCCGCTAC TGTGTCAGTG TTTGCAATCA GATTGCGTCT CACCTGCACA TACATGTCTT CAGAATCAAG 004480
004481 GTCTCTACAG CTCATTCTAA TCATCATTAA TGATGTAATT GGTATATAGG AACATCATGT TTTCTGCAGG AAAGAAAGTA 004560
004561 ACATATTAAG GAGAATGGGG GTGGATAAGA ACAAATATAA TTTATAATAA TCAATGTTGT ATAACTTTTA TTCTTTATTA 004640
004641 TTGGTAACAC GCCCTAACTA TCCTGTGTGA GAATGGGAAT TTCAAGTCCC ATCTTGTAAA TTGTATATGT TGTCATGCAG 004720
004721 GGTTTGGGCC AAGAAAGCAT GCAGAAAAAA ATGCCATGTG ATTGTAATTA TCCTGGATTC AGAATAATAC TGTGATGGGG 004800
004801 AGCCAGATCC GCAGTGGTGG AGAGTTCTAA TGTTGACTGT TTGCAGGCCA AAAGATGATT GCTTTATAAT TTTAACAAAT 004880
004881 CATTGTCTTT TAGTAACATC CTTGTTTAGT GTCTTCTCAA GCTTTCTTTA CTGAGGAATT CAGCTTGTGA CACAGATACA 004960
004961 TCCCACTAGC TTGTGAGGTG GAACTAGTAA TAAAGACCTT GAATTTGGAT TGAAAAGTTT CCTATCTTTA CATTGTTGAG 005040
005041 GAAGTCCttt tttttttttt tttttttttA ATTGCTCAAG AAATGATTCT CTCACAGGCT TGGGAAATCC TGTTAGCATG 005120
005121 CAGAATAATG TGGTAACTTT GTCAATTTCC Cattttattt ttttaaataa atatatGATC TAAAAGCCAA CTTTTTCTCA 005200
005201 GTTTTACTCA GTGGAAAGAT AAACTAAGTT TTAATGTTAT TTTTTTAAAT TTAAGCAAAA TTTATTTCTG TTCTTTAATA 005280
005281 AATAAGAAAA TGTGGTCCAC
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Predicted Small Protein

Name NONHSAT005167_smProtein_161:457
Length 99
Molecular weight 11667.966
Aromaticity 0.204081632653
Instability index 47.2591836735
Isoelectric point 9.87957763672
Runs 12
Runs residual 0.0165935533092
Runs probability 0.0658673379262
Amino acid sequence MDYPFFPKFFPQRDEFLPKIIVIVVVVVFLFFFSKGKQLSSCIKVSACFIHCKKQKAYFL
FVASPKDIPFRMPWNYVLSYHSLKKTKKNIFLFGRDLI
Secondary structure LLLLLLLLLLLLLLLLLLLEEEEEEEEEEEEEELLLLLLEEEEEEEEEEEEELLLLEEEE
EEELLLLLLLLLLLLLEEEEEHHHHLLLHHHHHLLLLL
PRMN LLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLL
LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
PiMo oooooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiiiiiiiiii
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