NONHSAT005201

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT005201

Source

NONCODE4.0

Same with

,

Classification

intronic(AS)

Length

2123 nt

Genomic location

chr1+:112282463..112290420

Exon number

3

Exons

112282463..112282699,112286997..112287151,112288682..112290420

Genome context

Sequence
000001 GAAGAGGACC CTGGGAAGGT GGCTCCCGCC TCACTCCTAG AGTGAAATCC TCGCAGCCCT GCCCTCGCGG GCGGAGCAGA 000080
000081 GACGCCGCCG CTTGGCCGGT TCACGCCTGT CACACAAAGC CGCCGAGGGT CGGCTGCGCC CCTGGCAAGG CTGTAGGGCT 000160
000161 GGGGATACTG AGTATGACAG GCGAGGTCCC TGCTCTCAAG AACTTACATG GGAGAGAAGG GGAGACAAGA TAAACAGATG 000240
000241 GAGCAACTCA ACCCAAAAAG GTTGGTCTGT ATGGTGACGG AATGTGGTCT CCCAGTTTTC AGCACAGCAC TCATTCAGCT 000320
000321 ATTCTGCTCT TCAGAAAGCA GGAGGGATGT GCCCTAAGGT GGACTATTGA AATGATGAAA GCCACTGAGG AAGAGCCAGA 000400
000401 GAATTCTCGT AGCTGTGATT AGACATCAAC CTTGGGCATG CTAAACATTT CAGCCTGGAC ACCCTGAGAA GAGCCAGTGC 000480
000481 CACTGGTGAC AGCTGCTTCT GTGCGGGCTT TTGCTTGGCC AGAGAGGCAG GACCTTCTCC CTGGCATTTT GAGGAGTGGT 000560
000561 GCCGGGTGGG CAGTGACTGC ACTAGCAACA GTCTATACCA AGAGAAGACC TCAAATTCCC AGAGAAGAAA GGCAGCGAGG 000640
000641 CCAAGAAATG CTGCCGCCGC TTAACAAGTG AAGATGCATA CTGGAGAATA GGAACTGAAC ACGCGAAGGA GTTTCGGCTT 000720
000721 TACTGCCTTC TCTCCTAGCA TTGAACAGAT CTTCTCTGCT GTTGATTATT CTCCATGAAT CATCATCCAT AGAAAGTGAC 000800
000801 TGAGGCAATA GAGAGTGAAT AATGAATCTC TCAAATAGTC TTTTGTGTTT CTGCCTGGAG GGTTTTGGAA ATAACTTGCA 000880
000881 TCTTAATCTT TCTGACTTAG AATCATAGAA TTTGGGAGCT GAAAAGGACC TTCATCAGGG CATGTGGCCT CACAGAAAGA 000960
000961 CTGGAAGAAA AGATTTGTGG GTATGAGCCT CTGGTTCATC ACTAAAAATA GGCCTAGTCT AACATATATT GGAGGCTTTC 001040
001041 CTTGTGTCAG GTACTCATTT ATTCTTCCAA AACCTTGGGA GGTAGGTGCT GCTATTCCTC CATTCTGCAG AGGAGGAAGA 001120
001121 GATGAGGAGA CAGTAGATCA CCAGAGGGCA GTGTGAGGGG TGTGCTGGAA CCATCATGTG GAACTGGCTC TGGTTCCAGA 001200
001201 ATCCACATCC TCTCGGTCAT TCCACTCCCA CATCAAGTGG CTTTGGACAA GTAATTTAAC TTCTTTGGAT CTCAGTTTTC 001280
001281 TCCTCCGTGA TCTCTAAAGT TTAAAAATTA CTAACAGTCT GCATCTGCCA CCCAAGCATG TGATTTTACA AGTCAGAAAA 001360
001361 GTGTAGCGCA GAAATGTTAA GTGACCTGCC CTAGGTCACC CAGGTTGCTA AGGGCAGAAT CAGCACAGAA ACCCAGGCCC 001440
001441 AGTGACCACT GCCCCCAGGC AAGACCTCCT TCCCTTCCAC TGCACTTTGG CAGGTGTTCT AGGGGAATCC AACTCCTTGC 001520
001521 CTTAGAGGAG ACCTGTTCAA TGATATCAGA TAGACTGGAG ATGTTACGTT TTGGTGTGGC CAATCACAAC ACCAGGATGA 001600
001601 GCTTAGGAGG CTGGTGATAT TTGTCTATCT AAGCACCCCC AACCTATCTA TCTGTCTGCT GTTTGTCTAT CTTTCTCAGG 001680
001681 TTATGCATAG TGACCAAACC CCGCCTGGTA ACTGTAGGGA AAGAGCATGA CTGGTGTGTT ACAGCTACAC ACGCCCCCTG 001760
001761 GTGGTATTTC CAGTTGTTTG TCCTCTTCAT GCAAATGTTG CCACCTTGTG CCAGCTCTCT CACCTAGCTT CCTTCATGAC 001840
001841 GACAGTGGTT GCAATTCTGC TCCTCTCTCT GCCTTCCCCT GTCCTTGGCT CCCCATGTCC AGAATCTGAT CATTTACTGG 001920
001921 TGTGCACCCT GGGATGTGAT GTGTGCTTTG GGAGGAGACA GGACCCAACA GTATCTCAGC TGTGCTCTGG TAATCAGTGT 002000
002001 GCACCACATT ACAAGCATCC TCATCCCAGT ATCCTCCCTA TTGAAAAAGA AATGGGAAAG GGGTGGATGT GTCAATAAAC 002080
002081 ACAACATTGA AGGCATCTGA AATAGAACAA AAAAAAAAAA AAA
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Predicted Small Protein

Name NONHSAT005201_smProtein_1835:2077
Length 81
Molecular weight 8673.1215
Aromaticity 0.0375
Instability index 75.42625
Isoelectric point 6.37091064453
Runs 13
Runs residual 0.0236842105263
Runs probability 0.0339502398326
Amino acid sequence MTTVVAILLLSLPSPVLGSPCPESDHLLVCTLGCDVCFGRRQDPTVSQLCSGNQCAPHYK
HPHPSILPIEKEMGKGWMCQ
Secondary structure LEEEELLHHHLLLLLLLLLLLLLLLLEEEEELLLLEEELLLLLLLEEEELLLLLLLLLLL
LLLLLLLLHHHHLLLLLLLL
PRMN -
PiMo -