NONHSAT005313
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT005313 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1001 nt |
Genomic location |
chr1+:113588674..113589674 |
Exon number |
1 |
Exons |
113588674..113589674 |
Genome context |
|
Sequence |
000001 gattgcacca ctgcactcca gcctgggtga cagagcaaga ctccgtctca aaaaaaaaga aaagaaaaTG Tggctgggga 000080
000081 cagtgactca cgcctgtaat cccaacactt tgggaggcct aggtgggtgg atcgcttgag gtcaggagtt cgagaccagc 000160 000161 ctggccaaca cagtgaaacc ctgtctctac taaaaaaaaa aaaaaaacat aaaaattagc ctgacgtggt ggctcatgcc 000240 000241 tgtaatccca gctacttggg aggctgaggc aagagaatgg cttgaaccca ggaggcagag gttgcagtga gccaagatgg 000320 000321 cgccactgca ctccatccag actgggagac agaacaagac tctgtcccaa aaaaaaaaaa aaaaaaaaag agaaaaTGTA 000400 000401 ACCTGATTCT GTAGTCTCAG GCTGATGAAT TTTGGAACAC TTAGCCGTAT AATCAGGtgt cactggtatg gcatactcca 000480 000481 cagtttggga tataaatata gtctcatctt ttatttttcc attaatcact tgagagccca actgcagtta gtggcaggag 000560 000561 gtccagtatc tccctggaga ccttcctacc aaccctctga attgttcaag aacaagggct tCTGCCTGTC TTGTCAGGTC 000640 000641 CTTGGGAGAG AGTGGAGGAG ATGGTGTTCT CGTGTTAATT GAGGCTGAGA AAGCAGCACT GCTCACGTTT TGCTTTATTT 000720 000721 TCTTCCTCTC CTAGGCAGAA TCAGTGTTAC ATTTGTGGTC AGATGAGCTA ACGACATCCT TCCTGACTTC TTTCTCAGAA 000800 000801 TTAGGAAACC CTGATTAGCA TTTAGAACCT CATTTTCACA GACTTCACTC ATTAAAACAT CAAGACCTAG GTAACGCACC 000880 000881 ACTGAAATTT CATAATATGG AGGATATGTT TAAATATGTT TAAAATATGT ATTTTTAACT GTGGTTAAAA TATGTTTTTA 000960 000961 AAATGTTTAT GAGTCAAAAT AATTaaaatt gccatttaac g |
Predicted Small Protein
Name | NONHSAT005313_smProtein_467:532 |
Length | 22 |
Molecular weight | 2417.8148 |
Aromaticity | 0.190476190476 |
Instability index | 50.6238095238 |
Isoelectric point | 3.79937744141 |
Runs | 6 |
Runs residual | 0.0394557823129 |
Runs probability | 0.0120414532179 |
Amino acid sequence | MAYSTVWDINIVSSFIFPLIT |
Secondary structure | LLLEEEEEELLLHHHEELLLL |
PRMN | - |
PiMo | - |