NONHSAT005321

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT005321

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2071 nt

Genomic location

chr1-:113739404..113748875

Exon number

3

Exons

113739404..113741312,113744395..113744464,113748684..113748875

Genome context

Sequence
000001 ATGGCTCATT TATTTGCTGA GTGGGACTGG AGGCCCATAG CCGCAGAAGA TCCTGGCCCC ACAGCAGCAG AGAGCAAGCT 000080
000081 CAGAGTGCTG TCAGGTCTCT CCTGCTGCCT CTCGCCATGA TGATGTAGTG GAAAAATGGT CAACAAAGCT ATTTCCTACT 000160
000161 GTGTGCTAAA TGCCCATCAT GGGAAGTCCC AGGAACAAGA AGATCATGGG TGAGGCAGCT GCTCAGAAAC AAATGTCTTT 000240
000241 CAACAATTAC CCCCAGGCAT GGGTGATACA TCCTCTTCGC AGACAGCAGA AAAACATCAG ATTTGTGATT TAATTGGGAG 000320
000321 TTTTCTGGGA TCGAACAGTG GCTTCGTTTA CAGGTGGGTT GCCGAGCGGC CATGGTAACT GATGGAGCAG TCACTATGGC 000400
000401 AGTCAGTAGG GCTGAGTGGG AAGGGTGCCC TGGGAGCCTG GAAGCGTGGG AACCAGCAGG GCCGCAGTCG TCCATTTCCC 000480
000481 ACCCAGTCTT TCCTGTCTCT CGGGGATCCC TGGCAGTTGC TCAGCTGATG CTGAATTGAG AAGCAGCCTG TGAACATGAA 000560
000561 GGGTATATGG CAGAGGATCC CAATTTGGCT TCTGCAAGAA GTAGAACCAA CAATGAGCTA CCTGGGGAGG CCCTGTGCCT 000640
000641 CCGACTCTTG CTACTCCTTG GAGCCTCGGG TCTCCGAGAA TAAACACCCA GTATACTCTA GGGACCTAAC CGCTAATCCC 000720
000721 AGGAGCCCGA GCTAAAGAGA AATAGTGTGT TTTGCTTGTT TCATCAAGCT GAAGTCTGGC TCACCTGATC CTGGCTTATT 000800
000801 TTTTGCTTCT CTGCAACTTC TGCCTGAGGG GACAGGCAGT CCCAGCGTAT ACACAGCCTG GGCACAGCCC TCCAGGTCCT 000880
000881 GCTGGGGCCA GAAATTCCTT CTGGCTTTAC CACTTCTCAT CCTGGTGCTT ATTGCCTGAG CCCTTTGGGA AAGGCACCCT 000960
000961 GTAGATGAGA ATTGCTGACA GTTTGGGGGA GTGAAAACGT GCAGGAAGGC AGAGGATGTT CCCGTTGCGT TTAAGATCAG 001040
001041 CTGTATTTGG AGAGAATTCA AAATGCAAGC GTACTTATAC AGTCATTGGA GGTCAAGTTA ATTTATTGCC TCCTGGTTAC 001120
001121 AGCATCAGTC CCGCCCCTTA GAACGAGCTG AATTTTGGAG TCTGGTGGCC AGGCAGAATC CTATGGAACC TTCTCCAGCA 001200
001201 TCTTCTTCAT GGTCGATCTC AAGGTCACTC AGGGCTTGTC TTGACTAGTA ATAATAGAAG AAGCCAGCAC TTTTAGAGTC 001280
001281 TCTCTTGCTT AGTACCCTAT GAAATGCTTT ACATACAATA TCTCAATCCT CACAAGAACC CTATAAAGAA AGGATTATTG 001360
001361 CTGCCTCCAT TCTATAAATG AAAAAACTAA GATTCAGAAA GGTCAAGTAA CAAACCCCAA GTCACAGAGC TGGTAAGTGG 001440
001441 CACGAAAAAA AACTCAGATT CGGGCAGGCT TGCATGTACA CTCTCCCTGT GAGGGATACT GCCTCCTGCT AGCCTAGCCA 001520
001521 CAACCAAAGG AAAGTAATAA TAGCTCAACC CTTCATCAGT GCCAGGCACT TTGCTAAGGC GTTTGCTTGC GTTCTTCTAA 001600
001601 CTCTTGAATG AGGAAACTGA GAATCAGAGA GATTAATTCC TTTCCCCAAA GTCACACAGC TAGTATGACA GAAACTATTT 001680
001681 TCCTCTAAAA TCTAATTTCT CCTTATTGTA CAGTAGTAGA CCCTCATTTT TAGCTGAGCA TGTGGCCTTC TAGAGTTATG 001760
001761 ACTACATTCT CCAGACTCTG TTGAAGCTAG GTGTCCATGT GACTAAATTG TGGGCAATAG GATATAAGCA AAAGCGGTAT 001840
001841 GTGCAACTTC CTGGAACTCT CAGCCTTCTC TCCGCTGCTG AAATGCAGTC GTGACAGCTT GAGCCAGAGG GTGCCAGCCA 001920
001921 GTGCCATGAT GTGACCAAGG CCATCAACAG CAGAGCCGCA AGGGAGCAGG AGCCTTGGTC CCTGAGGACA TGCTGGAGCT 002000
002001 AACTTGGGAA TCCTGAGGTG GCCACCTCCA AAATGTTACA TGAAAGAGAA AAGTAAACAT CTAACTTGCT T
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Predicted Small Protein

Name NONHSAT005321_smProtein_371:538
Length 56
Molecular weight 5726.4556
Aromaticity 0.0545454545455
Instability index 45.6381818182
Isoelectric point 4.57110595703
Runs 8
Runs residual 0.00606060606061
Runs probability 0.0308249425896
Amino acid sequence MVTDGAVTMAVSRAEWEGCPGSLEAWEPAGPQSSISHPVFPVSRGSLAVAQLMLN
Secondary structure LLLLLLEEEEEEHHHHLLLLLLEEELLLLLLLLLLLLLLLLLLLHHHHHHHHHHL
PRMN -
PiMo -