NONHSAT005387

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT005387

Source

NONCODE4.0

Same with

,

Classification

overlapping(AS)

Length

2803 nt

Genomic location

chr1+:115825655..115910884

Exon number

2

Exons

115825655..115825861,115908291..115910884

Genome context

Sequence
000001 GTTCCGTTCA GGCCTGTGCG AGAAAGACTC CCAGGCCCCT GGGTTCTCCA TAGCCCACAC TTCCACTCGG CTCCGCTTCT 000080
000081 CTTGCCCAGC TGTCTCTCCT CCAAGGAGCG GACAGGGCGG ACACGAGACC CGGGTGCCCT TTTGTCCTCT ATTCCAGCTC 000160
000161 TGGGCGGATC CTCCTCCCAT GATGTGGATG ATGCTGAGGA GAAAGTGGAA GACGGGTCTG AAGAAGCAAG GACTGGCAAG 000240
000241 TCTGATCCCC CACTCTGATT CTCATTGCTG AATGTCTGGG TCTTCCTTGT GTACCTGCTG GGGTGGGAGA CTGCTCGCAG 000320
000321 CATACCTGGC CTATGACATG CCTAGCTCTC TGGGGTGGAT CTTGGACAGG AAGACTGCTT CTGCCAGAGT AAAGAATATG 000400
000401 ACGGAGCTCC TCATCCGATG GAGCCTCTGG GAAGAGGCGA AGAGCCAGCT GGAAGCCTGG TGGGCCTCCG CTGCCAGCAG 000480
000481 GACAGATGCA TCAAGTCAGG TTTATGGGAG AAGTCTTCCC AGACCACTAT GTCCAAACTT CTGTCCATCC TGCTATAACC 000560
000561 TCTCCAGTTA GATGGATGAA AACCAGACCA GTCAGCCATG GACCAGAGCT GCAAAGATAA GAACCCAAAG AAGAAACAAA 000640
000641 TGGTGTAGCA TTAAGTATTT CTTTCCACTT GAGCAGAAAA ATCGGAGACT AAGGGAACTG GAGGAGTGTG GCCTTTGAAT 000720
000721 GAGACTTGAG GTGGTGAGAC AGCAAGTGAA CGTGGGGATA CTTGCTCAGA GCTTTGCTAG AATACCTCAT GGTTTACTGG 000800
000801 ACCTAGGACC TTCTTGATAT AGAAATGACC ATAAAAAGAA AGCAGACAGA TTCCCATGAA GAAAAAGTGA CCTCTCCTCT 000880
000881 GAATTCCATG CTTGGAAAAG TACTTATTTA AAGGAAGGAA AAAAGTCTCC AAAGCAAAAC CTGGCTTGTT TAGATAACTT 000960
000961 GGTCTAGGAA CATGGCGGAA GCTGAACCCA AGAACATGCC TGCACAGTGC AACTTCTGGG TGGGAGTCAG TTGTCTTTTC 001040
001041 TGAGTTCCCT GGACCTGAGA GTGTGACACT GAGACCAGGG GTGTGGAGAA ATCTATCTCA TATTTATGAC ATGTGGTGGG 001120
001121 ATCTTTACTG AGCATTTCAA CCCATCCTGT AGTAAAGAGT GCTGAATCAT GGTGGGTCAC CCTTCTAGAC TAGAGACAGC 001200
001201 CTGGGTGGGT TCACTGGAAC CAGCCAAAAT GGCCACAGGA CCAGCTTGAG TCTCCACTAC AAAGGGCAGG TGAGGGGAGC 001280
001281 AGGAGGTAGA ACGTTCACAG GACAGGACGA TCAGGAGCAG AGAGTTGCTC TAAGATATGA GCACCAGATG GGGAAATTTA 001360
001361 ACAGAGTGGA CTGTAGAGTC ACTTGGAAGG AAAAATGGAA GAGGATTTTA TATTACAGCT GCTGTCAATG GTTCTAACCT 001440
001441 TGTAGAAATC TATAGGTAAA AATATTGTGA AATTACATAT GCCCTTTGTT TTCACTTAGT TTTTAATTTC GCTTACTCTA 001520
001521 ATTACTAGCT TTTCAATATA GGTTTAAAAA GCAGTTATCA GATTTTTATT AATTAAGATA GAAGAAATCT TTTCTCATAG 001600
001601 ACTATTTAGT TTTTTATTTT GAAATTATGT TAAACTTATA GAAAAATTTA CAAAAATAGT ACAGAGAGTT CCTGTATATC 001680
001681 CTTCAACTAG CTTTCCCTAG TGTTACTGTC ATACTTAACA ATAATACATT GATCATAAAT AAGAAATGAA CATTGGTACG 001760
001761 ACACTATGGG CCTAACTACA GACGTTATTC CACTAGTATC CTTTTTCTGG CTCAGGATCC AATTCAGGAT CTCAAATTGC 001840
001841 CTTTAGTTAT CACGACTCCC TAGTCTCTTC CAATCTGTAA TTGTCCCAAA TTTTTCTTGA CAACTTCAAC ATATGTTTTT 001920
001921 AAAACTTTTT ATTTTGAGAT AACTTTAAAT TCACATGCAG TTGCAGGAAA TAATACAGAG AGATCCCTAT ATTCCTCACC 002000
002001 TAGTTTCCCC CATTGGTAAC ATCTCAATAA CTATGGCATA ATATCACAAC TTGGAAATTC ACATTGATGA GGTACATGGA 002080
002081 TCTTCTTCAG ATTTCACCAG TTTCACATGG ACCTGTGTGT ATCAGTGTGT GTGTGTGTGT GTGTGTGTGT GTCTGTTTGT 002160
002161 ATCAGTTCTG TGCAGTTTTA TCACATGTGT AGATTCATAT GGCCACTACC AGAGAACAGT TCTATCACAA GGACCCCCAG 002240
002241 TGCTACCCTT CTATAGCTAT TTCCGTTTAT CCCCAGCTCC CAATCCCTGG CAGCCATTAA TTTGTTCTCT ATCTCTATAG 002320
002321 TTTTGTCATT TCAAGAATAT CACATAAATA GAGTTATACA GTATGTAATC TCTTGAGATT GGCTTTTTTT CACTCAGCCT 002400
002401 AATTTTCTTG AGATCCATCC ATGTTGTTGC ATTGGTCAAT AATTCATTCA TGTTTCTTGC TAAGTCGTAC TCCATGGTTT 002480
002481 GATGGACCAG TTTGTTTAGG CATTCAATTG TCGAAGGACA TTTGCACAAC CTCAGTTCTT TTGAAGTCAG TTTTTGTAGA 002560
002561 ATGTCTTTTG ATTTGAGTTG GTCTGATGTT TTCACATATT TAGATCATGG CAATGCATTA TCATCATGAA TACCACAAAA 002640
002641 GGGCTGTGCC CTTCTGAGTT CATCCTATCA AGGAGTACAT GAAGTCAATA TGTCTCATTA CTGGTGATAT TAACTTTAAT 002720
002721 AGATTGGTTA ATTGGTGTCT GCCAGGTTTT TTTCTGCTGT GAAATTACTG TTTTTCCTTA GTAAATAATA AATATTTTGG 002800
002801 AGG
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Predicted Small Protein

Name NONHSAT005387_smProtein_2420:2575
Length 52
Molecular weight 5777.9475
Aromaticity 0.0980392156863
Instability index 46.6901960784
Isoelectric point 6.68023681641
Runs 12
Runs residual 0.0810522228693
Runs probability 0.0291173526467
Amino acid sequence MLLHWSIIHSCFLLSRTPWFDGPVCLGIQLSKDICTTSVLLKSVFVECLLI
Secondary structure LLLHHHHHHHHHHLLLLLLLLLLEEELEEELLLEEEEEEHHHLEEEEEEEL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLL
PiMo iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTToo