NONHSAT005591
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT005591 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
638 nt |
Genomic location |
chr1+:120837756..120838678 |
Exon number |
2 |
Exons |
120837756..120838005,120838291..120838678 |
Genome context |
|
Sequence |
000001 CTGCGCGGAA CACCCATCCT CCTGGGTCCT AGGCTGGGAC CCGGGCTGTC CGCCAGGGCT GGGAGACACT GGAGGAGGCC 000080
000081 GGCCGATGAT TACGCGCGAT GCCAACGACG ACTGCCCTAC GGTGGACCGC GGCTGCCCGT GTGCGGAGGA AAGGGAGAGG 000160 000161 CGGCTGGGTG CTGGCTGCGC TGCGGTCCGT GAGCCAGGAC GGAGTCCCAG GCTGTACAGT GATGGGCGGA GAGACTCGCA 000240 000241 GTCCTGAGAA ATCGGTGCCC CAGTCCCTGG AGGAGCCTCC GCCGCCTCCG CCAACTCCGC AGGACCCCGC CGGGAAGTAG 000320 000321 AGCCCACCCC TTTACCAATC ACCGCCCGTT TTCTATCGAC CGATGGGGCC CATAGCCAAT AGGAAGAGCT GATACCGAGA 000400 000401 GGCCCGGAAT GAGGGGGAGG AGCTGGCAAA ACTTGGAGGT GTGACTAGCA CTGCCGAGGC GTGGTCACAG ATTAAGCTCC 000480 000481 ACCCCGGGTT GTTGAACCCC GAAGTAGAAC TGATGGGCGG GATTAAGGTG GAACCGACGA CCAAACACAA ACTCTTGAGC 000560 000561 TAAGGCATGG CCAATTGGGC CGGGGTAGAG AGGAGGGGTG TTGCGGGGAA TTTTAACCAA TAAAGAGTAG AGGCCGGT |
Predicted Small Protein
Name | NONHSAT005591_smProtein_98:319 |
Length | 74 |
Molecular weight | 7674.6735 |
Aromaticity | 0.027397260274 |
Instability index | 106.505479452 |
Isoelectric point | 10.2556762695 |
Runs | 9 |
Runs residual | 0.0208572691118 |
Runs probability | 0.0374394001845 |
Amino acid sequence | MPTTTALRWTAAARVRRKGRGGWVLAALRSVSQDGVPGCTVMGGETRSPEKSVPQSLEEP PPPPPTPQDPAGK |
Secondary structure | LLLLHHHHHHHHHHHHHLLLLLEEEEEEEELLLLLLLLEEELLLEELLLLLLLLLLLLLL LLLLLLLLLLLLL |
PRMN | - |
PiMo | - |