NONHSAT005632
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT005632 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
594 nt |
Genomic location |
chr1+:142618795..142621538 |
Exon number |
2 |
Exons |
142618795..142618856,142621001..142621538 |
Genome context |
|
Sequence |
000001 GCGTCACCCA GAGGCGGTCT TGTAGCGGGG CCGGCTTGGG GCTTGGTTCT ATGTCCCTGC GGCTATGTTT CCAGTGTCCT 000080
000081 CTGGGTGTTT CCAAGAGCAA CAGGAAACGA ATAAATCTCT GGTGAGTTGT TTATTTGTTC TTCACTTTGT TTTACATTGT 000160 000161 ATTTTCTGAG TTTTTGGGTG TCTGTGAATT AAAAAGGAAA AGTAGAAATA AGTAAAACTC AGGTTGAAGG AAATATACAT 000240 000241 AAATAAGATA AAGCTGACCT GTAGATATAG GCAGGTTATA AGAGCTTAGA GTTGTCTAAG TTGGGTGCAA ATTTTCCTCT 000320 000321 GATCTTTCTG ATGCCGAGAC AAAAAAGGCA GTCATATTTG TTACGTGATT GGAGTGGAAC CCGAGAAGAG AACATGCTGT 000400 000401 GTTCTTGTGG GACAGGAAAG CTTGCGTGCA CCAAGTCCGA ACCACCACCT TCATTGGTGA CATAGATTAT GTGCTGGAAC 000480 000481 ATATTTCACA CCGGCCTGGC AGTAACCACT TGTAGTGTTG TACAGTGGAA ACGGTCATCT TCCGCTAAAG CACAGTGTGT 000560 000561 TTTGCAGTGG AAATGGTCAT CTGCCGCTAA AGCA |
Predicted Small Protein
Name | NONHSAT005632_smProtein_50:124 |
Length | 25 |
Molecular weight | 2850.4343 |
Aromaticity | 0.0833333333333 |
Instability index | 64.25 |
Isoelectric point | 10.9282836914 |
Runs | 5 |
Runs residual | 0.0267857142857 |
Runs probability | 0.0481363716657 |
Amino acid sequence | MSLRLCFQCPLGVSKSNRKRINLW |
Secondary structure | LLEEEEEELLLLLLLLLHHHHLLL |
PRMN | - |
PiMo | - |