NONHSAT005727

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT005727

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1888 nt

Genomic location

chr1-:143424333..143467651

Exon number

3

Exons

143424333..143426080,143465380..143465438,143467571..143467651

Genome context

Sequence
000001 GCCATTTTCC TCCGGAAGTG CGGATCCCAG CGGTGGTCGT GTAGCTGAGC AGGCCTGGGG CTTGGTTCTA TGTCCCTGTG 000080
000081 GCTATGTTTC CAGTGTCCTC TGGGTGTTTC CAAGAGCAAC AAGAAACGAA TAAATCTCTG CCATAGGAGT TTTAGCCAAT 000160
000161 TCAGAGGCCT TGCTCCCCAC AATTTGGAAA ATTCCTTTGG ATTTGACCAA GTCAGGAAGA GAAGGGAGAA AAGTGAAACA 000240
000241 ACAATAAAGC CCCAAGCATA AACAAACAAA AAGAGTTAAG CAAAACAACA AATGCACAAT TCATATGATT ACTGAGTGTT 000320
000321 CTAATGGTAA GGAGAAACTA AAAGCAGAAA TTAAAAGCAG CTGGTGAGTA ATCTTAAATT TTAGTCATTA AGGACAAATT 000400
000401 TTAAGACAAA ACTCTAATTC AGCTACTCAC CTGGAAACAA GGCTCAGGCT GGTGATCGTT CTCTGCCATC TTAGAAGCTG 000480
000481 AAAACAACTT ACACTCACCT TCCCTGTCAG AAGCAAGCTG AAACTCAGGA AAGGAGGTGC CTGCTCTCCA TCACCACAGA 000560
000561 AGCAGGAAAA CTTGCCTTCC TTGTTGGAAA TGAGTAAAAC TTCAGAAAAG GAGTTGTACA GAAAAATCAA ACTTAGATCT 000640
000641 CAACCAGATT TTGGGAGACC AGGGACTCTT TGCAGGGGAG AAGCTCCACA ACCTCAGCAA ATTATCCTGT TGGTTTGGGC 000720
000721 AATAAAGATA GCCCATGTTG GTATCAATCA ATAACGAGAT TTATCAAAGG TCAGGGCCAC CTTTGTAATG ACCTTCTCTG 000800
000801 TCTTTTTTTA TCTTTATTGG TATATACGTT TTGTCGAAAC TGGGAGTGTA ACACCTGATT TCTTCTGTTT TCCATTTGCT 000880
000881 TGAAAGATTT TTCACCATTC CTTCATTTTG AGCCTATGTA TGGCACTGCA TGTGAGATGG GTTTCTTGGA GACAGCATAC 000960
000961 TCAAATGGGT CTTTGTTCTT TATCCAGCTT GCCCCCCTGT GTCTTTCAAT CGGAGCATTT AGCCCATTTC CATTTAAGGT 001040
001041 TAGTAATGGT ATGTGTGGAT TAGATCCTGT CGTCATGCTG TCAGCTAGTT ATTTTGCAGA CTTGTGTATG TGGTTGGTTT 001120
001121 TTAGCATTAC TGGTCTGTGT ACTTCGGTGC ATTTTTGTAG TGGCTGGTGA TGGTCTTTTC TTTCCATATT TAGTGCTTCA 001200
001201 TTCAGGAGCT CTTGTAAGGT AGATCTGGTG ATAATGAATT CTCTCAGCAT TTGCTTGTCT GAAAAGGATC TTGTTTCTCC 001280
001281 TTCACTTATG ATGCTTAATT TTGCTGGACA TGAAATTCTG GGTTGAAATT TCTTTTTCTT TTAACCATGT ATAATAACAC 001360
001361 CATGTTATTA TATGGTATAT CTGTCTCTGC CATACTACGT GAAATTTCTT TTCTTTAAGA AGTTGAATAT CTTTTCTGGC 001440
001441 TTGTAGGGTT TCAGCTGAGA AGTCTGCTAA GTCTGATGGA ATTCCCTTTG CAGGTGACGT TGCCTTTCTC CCTAGCTGCC 001520
001521 TTTAACAGTG TTTCTTTCAT TTTGACCTTG GAGAATCTGA TGATTATATG TCTTGGGGAT GATCTTCTCA TGGCTTATCT 001600
001601 TACTGAGGTT CTCTGGATTT CCTGAATTGG AATGTTGGCT TGTCTGGATA GGTTGGGGAT ATTCTCATGA ATGATATTCT 001680
001681 GAAGTATGTT TTCCAAGTTG GTTCCATTCT CCTCATCTCT TTCACGTACA CTAATCAGTC ATAGATTTGG TCGTTTATAT 001760
001761 AATCTCATAT TTCTTGGATG TTTTGTTCAT TCATTTTCCT TCTTTTTTCC CCCATTCTTG TCTGCCTGTT TTATTTCAGA 001840
001841 AAGCCAGTTT TCAAGCTCTG GGATTCTTTC CTCTGCTTGG TCTATTCT
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Predicted Small Protein

Name NONHSAT005727_smProtein_1475:1624
Length 50
Molecular weight 5537.569
Aromaticity 0.122448979592
Instability index 44.112244898
Isoelectric point 3.38507080078
Runs 9
Runs residual 0.0216216216216
Runs probability 0.043396337514
Amino acid sequence MEFPLQVTLPFSLAAFNSVSFILTLENLMIICLGDDLLMAYLTEVLWIS
Secondary structure LLLLLEELLLHHHHHHHLHHHHHHHHHHHHHHLLLHHHHHHHHHHHHHL
PRMN LLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLL
PiMo ooooooooooooTTTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiii