NONHSAT005837
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT005837 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
449 nt |
Genomic location |
chr1+:144814560..144816049 |
Exon number |
2 |
Exons |
144814560..144814894,144815936..144816049 |
Genome context |
|
Sequence |
000001 GTGCTGACCT TCTGCTTCGA GGTCTCCTTG AGGACACTGT TTCAGAAATC TCTGTTGCAA TATTTGAGCG GATCACTCAA 000080
000081 CCCTTTCCAC TCTTAATTTT TCTCTACCAT CTCACCTTAG GCAATATAAA GTCCTGGTTC ACGCTCAGGA ACGAGAGCTG 000160 000161 ACCCAGTTAA GGGAGAAGTT GCGGGAAGGG AGAGATGCCT CCCGCTCATT GAATGAGCAT CTCCAGGCCC TCCTCACTCC 000240 000241 GGATGAGCCG GACAAGTCCC AGGGGCAGGA CCTCCAAGAA CAGCTGGCTG AGGGGTGTAG ACTGGCACAG CACCTTGTCC 000320 000321 AAAAGCTCAG CCCAGAAAAT GACAACGATG ACAATGAAGA TGTTCAAGTT GAGGTGGCTG AGAAAGTGCA GAAATCGTCT 000400 000401 GCCCCCAGGT AACACTGAAT ACTCAGGAAC AATTAATGGA TGGTAACAT |
Predicted Small Protein
Name | NONHSAT005837_smProtein_212:445 |
Length | 78 |
Molecular weight | 8950.315 |
Aromaticity | 0.0779220779221 |
Instability index | 70.7 |
Isoelectric point | 12.0119018555 |
Runs | 9 |
Runs residual | 0.0191981931112 |
Runs probability | 0.0137196019549 |
Amino acid sequence | MSISRPSSLRMSRTSPRGRTSKNSWLRGVDWHSTLSKSSAQKMTTMTMKMFKLRWLRKCR NRLPPGNTEYSGTINGW |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLLLLEEEELEELLLLLLHHHHHHHHHHHHHHHHHHHHHH LLLLLLLLLLLLEELLL |
PRMN | - |
PiMo | - |