NONHSAT005851
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT005851 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
840 nt |
Genomic location |
chr1-:144851946..144854450 |
Exon number |
2 |
Exons |
144851946..144852499,144854165..144854450 |
Genome context |
|
Sequence |
000001 ATGAGAAGTG ATCAGGGGGG CTTGGGGATG TTGGGAGTTG AGACTGATTT GATATCCCCA AACCTCCTGT ACCAGGAGCA 000080
000081 ATTGTGGCTG CAGAGGGAGT GGAGGACAGG GGGTGGATAG AAGGAGACTC CAAGCTGAAT AGCCAGAAAG AAATAAATGC 000160 000161 TTTAGAATTC TCATGCTAAG CAAGTAGGGT TAATTTCTGC TGGTGGTTTC TACTCTGTGG TGCTCTTTTG TTGTTTCAGT 000240 000241 AACCAGAACA CATGATGTTT TAAAGAAGGC AAGGACTAAC TTAGAGGTGA AATCCCTAAG GGCTCTGCCA TGTACTCCAG 000320 000321 CCTTGTGACC CTTGCCTTCC AGGAACCATG CAAGAAGCGC AGCCACCAGA AGTCCTTAAA ACAGCAGGAA AGGTGGGCCT 000400 000401 GTCCCCCTTT TGTGCAGCTA CCTATCTGCT GAGGAGCATC TGGGCCTCAT TCCTCCAAGT CCACGGGAGG GTCCAGAAGA 000480 000481 GGGAGTCAGA GATGTATCCT GGTGGAGCTG GGAGAAAGGC AGAAAGCCTT TCTGACGGCT ATGGAATACG ATTAGCCAAG 000560 000561 GTCCACTTGG CCCAGCACTA AGAAAAAGAT GCGTAGTTTG CACAGAAGGT TTTGTGATCC TGCCTCTCAA CAGCCCCAGC 000640 000641 AGCTTGGGAA CTAGCAAGAG CACATTTCTT GCCTCATCAG CTGTCCTGAG ATGGAAAACT CAGTGAATAT AGGACCCTGA 000720 000721 TTCCGATGAA AGGGGCACGT GGTCCCAATG CTGGAGCTCC TCTGGCAGGT TCTAAAAGCA CACTACTGAG CAGCGGTGCC 000800 000801 CTGCCGGACA CTGCTGGCGG GGGCTCAGTG AGCACTACTC |
Predicted Small Protein
Name | NONHSAT005851_smProtein_347:580 |
Length | 78 |
Molecular weight | 8424.6135 |
Aromaticity | 0.0779220779221 |
Instability index | 43.1181818182 |
Isoelectric point | 9.57733154297 |
Runs | 12 |
Runs residual | 0.0197628458498 |
Runs probability | 0.0416151445563 |
Amino acid sequence | MQEAQPPEVLKTAGKVGLSPFCAATYLLRSIWASFLQVHGRVQKRESEMYPGGAGRKAES LSDGYGIRLAKVHLAQH |
Secondary structure | LLLLLLHHHHHHLLLLLLLHHHHHHHHHHHHHHHHHHHHLEEELLLLLLLLLLLLLLEEE LLLLLLEEEEHHHHHLL |
PRMN | - |
PiMo | - |