NONHSAT005896

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT005896

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1709 nt

Genomic location

chr1+:145394428..145396136

Exon number

1

Exons

145394428..145396136

Genome context

Sequence
000001 CTCTTGAATG GTGCCAATCT TGGCTTCCAC CCACCTGGCA AACCAACTTA ACCTACGCCA GCAAAAGCAA CAGTTAAAGC 000080
000081 TAATTTAGCA GGAACAAATG TAAGGCAAAC AACTCCAGGC TTTCGGGAAC AGAAAAAAGT TCTCCGGTGG ATCAATAACT 000160
000161 AATTCAAAGT AGTGGACCCA GCACTCTGGA GTGGCAGCCT ATATTCATCA AATAAGACTG CAACTGTTAA CTCCCTACTC 000240
000241 GCTGCCCTAC CCGTTCGTCT TTGCTCCTCC TTTTCTTTGC TCTTCCGCTT CTCTCCTCCG CCTCCTCAAC TTCTTTTCTA 000320
000321 GAGCCCTCTC CTCTTTTTCC TGACCTTCCT AAAATGGTTG TATTTTACAG CCCTTTGCGG CTGATGAAGG CTTCAAAACC 000400
000401 TAAAAAGCAA ACAGATGCTC CCTAACACCT AGCTGAGAAT ATTTTAACTC ACTACAAAGG CCTTTCAAAA CCCCATTCAA 000480
000481 AATTTCCCAC CAACAAGAAG AGAACCAGTA TTTCCCTCTG GAGCCGTCCT AAGGCTGTTC TCCCTGGAGC AGTGTCGGAG 000560
000561 CGATTTTGGA CTCTTCTCAG AGCTGCTCAG CTTGTCTGCC TTCGCCCAGT TGAGAAGCCC ATCGTGGATT CGAAGTATGT 000640
000641 GGTCACTACA GACACTAGAA TCCCCAGATT CCTCttttct tttttttttc ttttttttga gaccgagtgc aatggcgtga 000720
000721 tctcggctca ccgcaacctc cgtcttccag gttcaagcaa ttctcctgcc tcagcctccc gagtagctga gattacaggc 000800
000801 atgcacctcc acgcccggct aattttgtat ttttagtaga gaaggggttt ctccgtgttg aggctggtct cgaactcctg 000880
000881 acctcaggtg atccgcccac ctcggcctcc caaagtactg ggattacagg cgtgagccac cgcgcccggc cCAGATTCCT 000960
000961 CTTTTCTTGA TGAATTTGGG GTGAATGGAG ATGATTTCTG GAATCAGTTA CCATAAAAGG ACAGTAGCCG CTGTGGCGAT 001040
001041 TTAGAAGTTC ATGTTTCCAT GGTAGCTAAG CGAGAGGGTT AAATAAAAAC ACAgcgccca acgtggggct cgaacccacg 001120
001121 accctgagat taagagtctc atgctctacc gactgagcta gccgggcACT GATTACTGGC GTCTTCTTAT GTGGAATCAT 001200
001201 TTTCCACTGA CGGAGCGGTT GTATGATCTA ATTGCATATT ATTGCGTGTG AAAGAAGTTT CAGGACCTAG GACTGGTGGA 001280
001281 CACGGCAGTA GCCTTTTCAT AATAGCTTTT TGCCATGAAG GAATTCGGGG TTTAGAGAGC GATGGGGGCT GCAGAGAGCC 001360
001361 AGGAAGTCTC GCGGAGGACT CGGGAATCAC GAGTCCTGCC TGAAACCTTA GTGTTTTCCG CACATTCCTT CCACTGAGGG 001440
001441 AACCTCCTCA CCCACTTCAG AGGAGGGTGC GAAAGAGCCC AAGGAAACTC AGATGAGAGG CGCAAAGACC TCTCTGCAAA 001520
001521 GCATTTTAAT TCTCCATCCT GGAAGAGGCA CTGAGTTCCA GAGTCACAAG GGAAGGGTTC TCTCCTCTGC TCAAGTGAAG 001600
001601 GCCAAAAGAA CAACCGTGGT CCCAGCTCCG TGGGCCTCCA TATCGCTCTA AAGCTTCCCG CCTGGGCTGC TTAGCACCTT 001680
001681 GGTGGGCGAG CCGCAGTGTG AGCCAACTG
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Predicted Small Protein

Name NONHSAT005896_smProtein_353:424
Length 24
Molecular weight 2636.1829
Aromaticity 0.0869565217391
Instability index 66.5917391304
Isoelectric point 10.171081543
Runs 5
Runs residual 0.0103519668737
Runs probability 0.0389683801449
Amino acid sequence MVVFYSPLRLMKASKPKKQTDAP
Secondary structure LEEEELHHHHHHLLLLLLLLLLL
PRMN -
PiMo -