NONHSAT005941
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT005941 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
1346 nt |
Genomic location |
chr1-:145498532..145508615 |
Exon number |
2 |
Exons |
145498532..145498697,145507436..145508615 |
Genome context |
|
Sequence |
000001 ATACCTTCAG ATATCCTGTT CGCCTGTCGA GGTTGAGATG AATGTTTTTA ATTTCCCCAT ATTCTGCGAA TTTGTCGTGT 000080
000081 ATGTCTTCTT CGGTGGCTTC CTCATGGACT CCAGTTACAA AGAGAATCCA GCCTTCAACA GCTGTTGGGG GACGGGGGGA 000160 000161 AGTTGTATGA GTACATGAGA GACACTTTAA GCAGGCTCAC AGGAATAGAG TGAGTGCGGA CTCAGATTGT TTAAGCTATC 000240 000241 TCTGAACCCA TTCCTACTGC GTTTAACTAT TTTATTGGTT TCTAACTACT ACCACAGACA CGGATACCTC ACAGGTTCCA 000320 000321 TTATTACTCA CAGCGTTGTG GTCCGGGTTC ATCGCCATCC TGCTCCACGC TGTCATAATC CTCACGCATC CGCGCTCGGG 000400 000401 ACCCCTCTTC TATAAGGGAC ATACACGAGA TCACCGAAAA CTCCTCCTTT CTCCCATTGT TCCTATGAGG TGGGTGGGGA 000480 000481 CTCCAAAACC CGTAGCTCCT GCCCTACTAG GCCACTCTAC CCCATTTTCC CCACACTCAC CGGAGCCAAA GCCGCGACCC 000560 000561 TTCCGTTTCT TCGCTTTTTC TTTCAGTTTG TGAATGCTCT CTGGAACCCC AGAAGATAAA AGAATAAGTA ACTATGACAG 000640 000641 TCATTTGTAA CAATCGTCTC TTTCCCAATA CACTACCAGC AAGCCGACCC ACACCGCCTC CAGTCTTAGT GCCTTCCCGG 000720 000721 TCACGCCCTC CCTTCTCCTG AAGGGGGCGG AATCTCTAAT CCACCCAAGA CCCGGTTCCT CGATTCCCAT CCTTACGACC 000800 000801 GAGGAAAAAA GAGTAAATTT TCCTATTATA GCCTTCTCTC GCACCTTCCC CGCTTCCCAC CAGCCGTCTC CACTGTCCTC 000880 000881 ACCGTCCCCA TCCTCATCCA TGGCGAAATC TTCGCCCCCA GCCTCGTGAA GATCTAGCAC GTCCGCCATC TCGCCTTCGA 000960 000961 TCGAGATCTC GTCTGTGCCG CTCAGACACT AGGTACCTCG GGAAACTGTC GCAGAGGGGA AAGGTCGCCA GTCAAGCTGA 001040 001041 CCAATCAAAG GCTAACTCTA AATCCCTCCC TCTGCACGGT AAAAACACGC AAATTGGGGC GGGCCTAGTG CGGAAAGATA 001120 001121 CCGGAAGTGT TTCTGTGGCC ATCTTGAACA GATCGCAAGC TAAATCATCC ATCTTAGGAG CTCCTTGCCT GCCAGTCGGG 001200 001201 CTTCATCCAG CTCCCGCTCA GTAGAGGCCA GCTCTCTAGA CAGTGCCCCC GGCACACTCT GCTCCCGGCT CACCCAGTCC 001280 001281 AAGGCCATTT GGTGGCGAAT ATCATCATCC AGGGCCCGGT GCGAATAATG AGCCAACACC TCCTAG |
Predicted Small Protein
Name | NONHSAT005941_smProtein_464:592 |
Length | 43 |
Molecular weight | 4723.4605 |
Aromaticity | 0.166666666667 |
Instability index | 67.3166666667 |
Isoelectric point | 11.7229614258 |
Runs | 7 |
Runs residual | 0.00949367088608 |
Runs probability | 0.019229313347 |
Amino acid sequence | MRWVGTPKPVAPALLGHSTPFSPHSPEPKPRPFRFFAFSFSL |
Secondary structure | LEELLLLLLLLHHHLLLLLLLLLLLLLLLLLLEEEEEEEELL |
PRMN | - |
PiMo | - |