NONHSAT006114
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT006114 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1065 nt |
Genomic location |
chr1-:147906022..147931980 |
Exon number |
5 |
Exons |
147906022..147906377,147906574..147906695,147907256..147907464,147908554..147908674,147931724..147931980 |
Genome context |
|
Sequence |
000001 CTCCTCCTCC TCCTCCTCCT CTCACCCAGG ATCACTTCCG AAACCACTTG GCCTTCAGCC CCTGCCTCGG CCAGAGGTTT 000080
000081 CATTTTTAAC TGAATATTTA CGAAAGCTGA AAGCGTGCGA GGGGGGTGGG GTGGAAATAG CGGCTGCTTC TTTTCCAAGG 000160 000161 ATTTATTTAA TGGGGATGTG TTCAAGGCAA GACCGAATTC AGAAGGATAT CGACGTCGTG ATCCAGAAGT CCAGAGCTGA 000240 000241 GGACTGCCTG TTTGCAGTTC TGTTTCATCA AATGGAAATG GGACATGGAC AGTTTCTCCT ATCCCATGCA GACCATGCTC 000320 000321 CTGAATTAAA ACTGCAGAAT GTGTTAAAGC ATCATTCAAC ATCGTGAGCA CATTTGAGAT ACTGTACAGG ACAACCTGCT 000400 000401 TTTCATATTC TCTGTGAATT TCAAAGACGA CTGGGATTTT CTTCCTCCTC TACCACCCTG AACAGCAAGA CCAATACATC 000480 000481 CTGTATTTCC TCCTCTTCAG CCTACTTGTG AAGACAAGGA TGAAGACCTC CATGATGAGC CATCTCCACT TAATGACTGT 000560 000561 CTCACATTGG CCGGCAACTT GTTCCAGATG AAATCTTGCT CTGTCACCCA GGCTGGAGTG CAATGGCTCG ATCTCGGCTC 000640 000641 ACTGCAACCT CCACCTTCTG GGTTCAAGCA ATTCTCCTGC CTCAGCCTCC TGAGTAGCTG GGATTACAGA TGGAGTCTCA 000720 000721 CTGTGTCCCC AGGCTGGAGT GCAGTGGCGC GATCTCAACT CACTGCAAGC TCTGCCTCCC GGGTTCACGC CATTCTCCTG 000800 000801 CCTCAGGCTC CCGAGTAGCT GGGACTACAG GCGCCCGCCA CCACTCCTGG CTAATTTTTT TTGTATTTTC AGTAGAGACG 000880 000881 GGATATCACC ATGTTAGCCA GGATGGTCTC GATCTCCTGA CCTCGTGATC CGCCCTCCTC AGTCTCCCAA AGTATTAGGA 000960 000961 TTACAGGCGT GAGCCACCGC CCCCGGCCCT CAAAGATTGT TATGAGTCCT CACAGATGTC AGAGGACGAT GCTGTGACCT 001040 001041 ATATTTGCAA ACGCCCGGAA GACTT |
Predicted Small Protein
Name | NONHSAT006114_smProtein_587:817 |
Length | 77 |
Molecular weight | 8206.264 |
Aromaticity | 0.0921052631579 |
Instability index | 76.1223684211 |
Isoelectric point | 8.84112548828 |
Runs | 14 |
Runs residual | 0.0428009679371 |
Runs probability | 0.0389380977616 |
Amino acid sequence | MKSCSVTQAGVQWLDLGSLQPPPSGFKQFSCLSLLSSWDYRWSLTVSPGWSAVARSQLTA SSASRVHAILLPQAPE |
Secondary structure | LLLLEELLLLEEEELLLLLLLLLLLLLLEELLLLLLLLLLEEEEEELLLHHHHHHHHHHH LHHHHHHHEELLLLLL |
PRMN | - |
PiMo | - |