NONHSAT006150
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT006150 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1302 nt |
Genomic location |
chr1+:148854138..148891740 |
Exon number |
10 |
Exons |
148854138..148854161,148873406..148873522,148876278..148876418,148881948..148882049,148882203..148882367,148887618..148887806,148888062..148888229,148889579..148889689,148890193..148890261,148891525..148891740 |
Genome context |
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Sequence |
000001 AAGGAGCCTG GGGCGCCGGC GCCTGCTTGG AGTACCCATA ATACAGTGAG CCCACCTTCC TGGTCCCCAG ACATTTCAGG 000080
000081 AGGTCGGGAA ATTTTTAAAC CCAGGCAGCT TCCTGGCAGT GCCATTTGGA GCATCAAAGT GTCTGTTACA TAGGGCCATG 000160 000161 GGTCTGGATT TCCAGGAAAG CGGAGACCTC GAGGTGCAGG ACTGTCGGGG CGAGGTGGCC GAGGCAGGTC AAAGCTGAAA 000240 000241 AGTGGAATCG GAGCTGTTGT ATTGCCTGGG GTGAGGCTTG CTGTGTCTAC TGCAGATATT TCATCAAATA AGGATGATGA 000320 000321 AGAAAACTCT GTGCTCGATA TGGTTGTGTT GTTTTCTAGC AGTGACAAAT TCACTTTGAA TCAGAGTCTC CATTTAAAAT 000400 000401 ATGTTCTGTT TTCTTAACTT CAGGATACAT GTGTAGTTTG TGGCAGTTTT GGCCAAGGAG CAGAAGGAAG ATTACTTGCC 000480 000481 TGTTCTCAGT GTGGTCAGTG TTACCATCCA TACTGTGTCA GTATTAAGGT AAACATCCTT AAACTGAGTT TACAGATCAC 000560 000561 TAAAGTGGTT CTTAGCAAAG GTTGGAGGTG TCTTGAGTGC ACTGTGTGTG AGGCCTGTGG GAAGGCAACT GACCCAGGAA 000640 000641 GATTCCTGCT GTGTGATGAT TGTGACATAA GTTATCACAC CTACTGCCTA GACCCTCCAT TGCAGACAGT TCCCAAAGGA 000720 000721 GACTGGAAGT GCAAATGGTG TGTTTGGTGC AGACACTGTG GAGCAACATC TGCAGGTCTA AGATGTGAAT GGCAGAACAA 000800 000801 TTACACACAG TGCGCTCCTT GTGCAAGTTT ATCTTCCTGT CCAGTCTGCT ATTGAAACTA TAGAGAAGAA GATCTTATTC 000880 000881 TGCAATGAAG ACAATGTGAT AGGTATAGAT GGATGCATGC AGTTCGTCAG AACTTAAATA CTGAGGAAGA AGTGGAAAAT 000960 000961 GTAGCAGACA TTGGTTTTGA TTGTAACATG TGCAGACCCT ATATGCCTGC GTCTAATTCA GTGCCTTCCT CAGACTGCTG 001040 001041 TGGATCTTCA CTTGTAGCAC AAATTGTCAC AAAAGTAAAA GAGCTATTAG ACCCACCCAA GACTTATACC CAGGATGGTG 001120 001121 TGTGTTTGAC TGAATCAGGG AAGACTCAGT TACAGAGCCT CACAGTTACA GTTCCAAGAA GAAAACTGTC AAAACCAAAA 001200 001201 CTGAAATTGA AGATTATAAA TCAGAATAGC GTGGCCATCC TTCAGACCCC TCCAGACATC CAATCAGAAC ATTCAAGGGA 001280 001281 TGGTGATATG GATGATAGTC GA |
Predicted Small Protein
Name | NONHSAT006150_smProtein_428:526 |
Length | 33 |
Molecular weight | 3935.7067 |
Aromaticity | 0.1875 |
Instability index | 66.734375 |
Isoelectric point | 9.61126708984 |
Runs | 7 |
Runs residual | 0.0271045918367 |
Runs probability | 0.0448179271709 |
Amino acid sequence | MCSLWQFWPRSRRKITCLFSVWSVLPSILCQY |
Secondary structure | LLLHHHLLLLLLLEEEELLHHHHHHHHHHHLL |
PRMN | - |
PiMo | - |