NONHSAT006150

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT006150

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1302 nt

Genomic location

chr1+:148854138..148891740

Exon number

10

Exons

148854138..148854161,148873406..148873522,148876278..148876418,148881948..148882049,148882203..148882367,148887618..148887806,148888062..148888229,148889579..148889689,148890193..148890261,148891525..148891740

Genome context

Sequence
000001 AAGGAGCCTG GGGCGCCGGC GCCTGCTTGG AGTACCCATA ATACAGTGAG CCCACCTTCC TGGTCCCCAG ACATTTCAGG 000080
000081 AGGTCGGGAA ATTTTTAAAC CCAGGCAGCT TCCTGGCAGT GCCATTTGGA GCATCAAAGT GTCTGTTACA TAGGGCCATG 000160
000161 GGTCTGGATT TCCAGGAAAG CGGAGACCTC GAGGTGCAGG ACTGTCGGGG CGAGGTGGCC GAGGCAGGTC AAAGCTGAAA 000240
000241 AGTGGAATCG GAGCTGTTGT ATTGCCTGGG GTGAGGCTTG CTGTGTCTAC TGCAGATATT TCATCAAATA AGGATGATGA 000320
000321 AGAAAACTCT GTGCTCGATA TGGTTGTGTT GTTTTCTAGC AGTGACAAAT TCACTTTGAA TCAGAGTCTC CATTTAAAAT 000400
000401 ATGTTCTGTT TTCTTAACTT CAGGATACAT GTGTAGTTTG TGGCAGTTTT GGCCAAGGAG CAGAAGGAAG ATTACTTGCC 000480
000481 TGTTCTCAGT GTGGTCAGTG TTACCATCCA TACTGTGTCA GTATTAAGGT AAACATCCTT AAACTGAGTT TACAGATCAC 000560
000561 TAAAGTGGTT CTTAGCAAAG GTTGGAGGTG TCTTGAGTGC ACTGTGTGTG AGGCCTGTGG GAAGGCAACT GACCCAGGAA 000640
000641 GATTCCTGCT GTGTGATGAT TGTGACATAA GTTATCACAC CTACTGCCTA GACCCTCCAT TGCAGACAGT TCCCAAAGGA 000720
000721 GACTGGAAGT GCAAATGGTG TGTTTGGTGC AGACACTGTG GAGCAACATC TGCAGGTCTA AGATGTGAAT GGCAGAACAA 000800
000801 TTACACACAG TGCGCTCCTT GTGCAAGTTT ATCTTCCTGT CCAGTCTGCT ATTGAAACTA TAGAGAAGAA GATCTTATTC 000880
000881 TGCAATGAAG ACAATGTGAT AGGTATAGAT GGATGCATGC AGTTCGTCAG AACTTAAATA CTGAGGAAGA AGTGGAAAAT 000960
000961 GTAGCAGACA TTGGTTTTGA TTGTAACATG TGCAGACCCT ATATGCCTGC GTCTAATTCA GTGCCTTCCT CAGACTGCTG 001040
001041 TGGATCTTCA CTTGTAGCAC AAATTGTCAC AAAAGTAAAA GAGCTATTAG ACCCACCCAA GACTTATACC CAGGATGGTG 001120
001121 TGTGTTTGAC TGAATCAGGG AAGACTCAGT TACAGAGCCT CACAGTTACA GTTCCAAGAA GAAAACTGTC AAAACCAAAA 001200
001201 CTGAAATTGA AGATTATAAA TCAGAATAGC GTGGCCATCC TTCAGACCCC TCCAGACATC CAATCAGAAC ATTCAAGGGA 001280
001281 TGGTGATATG GATGATAGTC GA
[back to top]

Predicted Small Protein

Name NONHSAT006150_smProtein_428:526
Length 33
Molecular weight 3935.7067
Aromaticity 0.1875
Instability index 66.734375
Isoelectric point 9.61126708984
Runs 7
Runs residual 0.0271045918367
Runs probability 0.0448179271709
Amino acid sequence MCSLWQFWPRSRRKITCLFSVWSVLPSILCQY
Secondary structure LLLHHHLLLLLLLEEEELLHHHHHHHHHHHLL
PRMN -
PiMo -