NONHSAT006332
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT006332 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
550 nt |
Genomic location |
chr1-:150802385..150807339 |
Exon number |
4 |
Exons |
150802385..150802456,150804294..150804379,150804810..150804875,150807014..150807339 |
Genome context |
|
Sequence |
000001 TTATTTTCAA TGCTGCCTTT GAACTTAAGA GTGAGATTCA TTGATGATAA TTGAAGTATT TTAGGCTTGA AAAAAAATTC 000080
000081 ATCTCCTGCT TGGTCAGTTC TGTTATAAGC AAGGAGATTA AGGGCATGAA TAGGATGCTT ACTTATCTTT GCCTTCAGTA 000160 000161 TCTCTCCCCC TCTTCCCCAC ACACAAAAAT GCACTCCAGA CTGCTCTTCA CATCTTCCTT CAGGGCGTAT CCTGGATCTA 000240 000241 AAGACTGGAA CAGTGAAAAA GGAAGGTCAG CAGTCTTCCA TGAGAATGTG TATGGGCTCA AGGAGATCGT TTATTTGCCG 000320 000321 AATGAGGTGT GGCAGTAGCT CTGTGGACCC AGTTTCTGTG AATAGGCTGA GCTTTGTGAG GAACAGATGC AGGAATGGAC 000400 000401 TTGGCTCTGT AAAGGATGGG GAACCTCACT TCGTGGTGGT CCACTGCACA GGCTACATCA AGGCCTGGCC CCCAGCAGGT 000480 000481 GTTTCCCTCC CAGATGATGA CCCAGAGGCT GGCCAGGGAA GCAAGTTTTG CCTAGTGGCC ATTGGCAGAT |
Predicted Small Protein
Name | NONHSAT006332_smProtein_125:337 |
Length | 71 |
Molecular weight | 8241.3358 |
Aromaticity | 0.142857142857 |
Instability index | 62.5628571429 |
Isoelectric point | 9.25042724609 |
Runs | 12 |
Runs residual | 0.0265912305516 |
Runs probability | 0.0456412294647 |
Amino acid sequence | MNRMLTYLCLQYLSPSSPHTKMHSRLLFTSSFRAYPGSKDWNSEKGRSAVFHENVYGLKE IVYLPNEVWQ |
Secondary structure | LLHHHHHHHHHHLLLLLLLLHHHHHHHEELLEEELLLLLLLLLLLLLEEEEEEEELLLEE EEEELLLLLL |
PRMN | - |
PiMo | - |