NONHSAT006452
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT006452 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1390 nt |
Genomic location |
chr1-:151921999..151923388 |
Exon number |
1 |
Exons |
151921999..151923388 |
Genome context |
|
Sequence |
000001 TGTCTACCAG GGTGACCTGG AAGTCCTACG GGGTGTCCCC CTTGGCCCCA GGGCCCTCAG CAGCTGCTCC TACAAGAATG 000080
000081 GGCTGGTGCC TGCATCAGCT CCTGGAGCTC CTCCCAAATG GGCAGCAGCA GCAGCTTCTG GAGTGGCTGG GTATCAGCAT 000160 000161 GGGTCTGGGT GGAGGCTATG CCAGGGCCAG TAGTATGGGA GGCATCACAG CCGCCATGGT GAACCAGAGC CTGCTAAGCC 000240 000241 CCTTAAGCTG GAGGTGGACC CCAACATCCA AGCCGTGAGC ACCCAGGAGA AGGAGCAGAT CAACACCCTC AACAAGTTTG 000320 000321 CCTCCTTCAT CAACAACGTG GGGGTTCCTG GAGCAACAGA ACAAGATGCT GAAGACCAAG TGGAGCCTCC AGCAGCAGGA 000400 000401 GAGGAGGCTG GAAGCAACAT AGACAGCGTG TTCCATAGCT ACATCAACAA CCTTGGGTGG CAGCTGGACA CTCTGGGCCA 000480 000481 GGAAAAGCAG AGGCTGCTGG AGGACTTCAA GAAGAAGTAG GAGGGTGAGA CTGATAAGCC AACAGAGATG GAGAATCAAT 000560 000561 CTGTCCTCAT CAAGAAGGAC GCGCATGAAG CTTAAGTGAA CAAGGTAGAG CTGGAGTCTC GCTTGGGAGA GCTGACTGAT 000640 000641 GAGATCAGCC TCCTCAGGCA GCTGTATGAA GAGGAGACCT CCAGACTCGG ACACATCTGT GGTCCTGTCT ATGGCCAAAA 000720 000721 GCCGCACACT GGATGTGGGC AGTGACATGG CCAAGTCCCC AAGTGGGAGG AGATAGCCAA AGCAGCTGGG CGAGGCTGAG 000800 000801 AGGGCACCAG ATCTAAGTGT GAGGGGTTGC AGACACTGGC TGGGAAACAC AGGGATGCCC TGTGGTGCAC AAAGATGCAG 000880 000881 ATCTCAGAGA TGAACCCGAA CATCATCTGG CTCCAGCTGA TACTAAGGGC CTCAAAGGCC AGAGGGCTTC CCTGGGGTTC 000960 000961 ACCATCGGAG AGCCAAGCCG CTGGCTATAA AGGAGCCAAC GCCACGCTGG CAGAGCTGGA GGCCACCCTG CAGTGGGACA 001040 001041 AGCAGGGCAT GACATAGCAG GTACGCGAGT GCCAGGAGCT GATGAACGCC AGGCTCCCCT GGACACTGAG TTCACCACCT 001120 001121 ACGGGAAGCT GCCGGAGGAC AAGGACAGCA GCCTGGAGTC TGGGATGCAG AACATGAGTA TCCATACAAA GACCACCAGT 001200 001201 GGCTGCTCAG ATGGGCTGAG CTCGGCCTAC TGGGCCTCAC AAGCTCTGGC CTCAATCACA GCCTGGGTTC CAGCTTTGAC 001280 001281 TCTGGCAAGA GCTCTGACTC CTTCAGCCGT ACCAGCGCTT CCAAGGCCAC GGTTTTGAAA AAGATCCAAA CCAGCAATAA 001360 001361 CAAGCTGGTG TCCAGCCCTC TGCTGTCCTG |
Predicted Small Protein
Name | NONHSAT006452_smProtein_77:277 |
Length | 67 |
Molecular weight | 7169.2707 |
Aromaticity | 0.0757575757576 |
Instability index | 49.3121212121 |
Isoelectric point | 7.97784423828 |
Runs | 11 |
Runs residual | 0.0160587915079 |
Runs probability | 0.0454304571952 |
Amino acid sequence | MGWCLHQLLELLPNGQQQQLLEWLGISMGLGGGYARASSMGGITAAMVNQSLLSPLSWRW TPTSKP |
Secondary structure | LLHHHHHHHHHLLLHHHHHHHHHHHHHHLLLLLLEEELLLLHHHHHHHHHHHLLLLLLEE LLLLLL |
PRMN | - |
PiMo | - |