NONHSAT006823
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT006823 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
933 nt |
Genomic location |
chr1+:156182796..156203443 |
Exon number |
7 |
Exons |
156182796..156182967,156190468..156190678,156193137..156193351,156193642..156193733,156195348..156195459,156202111..156202216,156203419..156203443 |
Genome context |
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Sequence |
000001 TCAACTTCAA CATGGCCGAA GCAAGTAGCG CCAATCTAGG CAGCGGCTGT GAGGAAAAAA GGCATGAGGG GTCGTCTTCG 000080
000081 GAATCTGTGC CACCCGGCAC TACCATTTCG AGGGTGAAGC TCCTCGACAC CATGGTGGAC ACTTTTCTTC AGAAGCTGGT 000160 000161 CGCCGCCGGC AGacggagtt tcactcttgt tgcccagact ggagtgcagt ggcgtgatct cggctcatgg caacctccac 000240 000241 ctcctgggtt caagcaattc tcctcagcct cctgagtagc cgggattata ggtgccgcca ccacgcccag ctaatttttg 000320 000321 tatttttagt agagatgggg tttcaccatg ttagccaggc tgatctcgaa ctcctaatgt cagtcccttt tctagctcct 000400 000401 cCGGTCATGA TACATCCACA CTCCAGACTC TGTGTCTGGC CCTGCATGGA AGCCAACATG gccagatggc ctggattgag 000480 000481 tcccagctgg ctccatcaca tgctggttgt gtgaccttgg gcaagcttct ctctgcctca gcttcctcat ctgaaaaatg 000560 000561 ggggtgatga taatagaacc ccgcctcaca gaatcatggt tgatctgcag tccctttgac ggcaggaatt gtactgtttc 000640 000641 gtctttgggt ttgtaccacc aagcttggcc tggtacctgg tcggtgctca CTCTCCACTC CTTCATTGGG ACGGAAGTGC 000720 000721 TGGTCCCCGC CTGCCCTCTG GTGGACAGTC TGTGAAACAG GCCTTCAGTT GGGCGGCGTG CAGGTTACCA CAGGGGAGGA 000800 000801 AGCTACCAGA GATTCACTGA CTGCTATAAG TGCTTCTACC AGTTGCAGCC TGCGATGACA CAGCAAATCT ATGACAAGTT 000880 000881 TATAGCTCAG TTGCAGACAT CTATCCGGGA GGAAATCTCT GACATCAAAG AGG |
Predicted Small Protein
Name | NONHSAT006823_smProtein_11:274 |
Length | 88 |
Molecular weight | 9296.325 |
Aromaticity | 0.0689655172414 |
Instability index | 57.2965517241 |
Isoelectric point | 7.94158935547 |
Runs | 10 |
Runs residual | 0.0233169129721 |
Runs probability | 0.0380586468822 |
Amino acid sequence | MAEASSANLGSGCEEKRHEGSSSESVPPGTTISRVKLLDTMVDTFLQKLVAAGRRSFTLV AQTGVQWRDLGSWQPPPPGFKQFSSAS |
Secondary structure | LLEEEELLLLLLLLLLLLLLLLLLLLLLLLEEEEEEHHHHHHHHHHHHHHHHLLLEEEEE EELLEEEEELLLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |