NONHSAT006852
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT006852 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
764 nt |
Genomic location |
chr1-:156374048..156396664 |
Exon number |
4 |
Exons |
156374048..156374393,156383848..156384090,156384446..156384545,156396590..156396664 |
Genome context |
|
Sequence |
000001 GAGCTGGGCA TCCAAGAAGA AGCAGCCTCA TTTGTTTTCT GGTGTCATCG TAGGTGGCCA CCTATGGCTT TTGGGCTTCT 000080
000081 CACCTGGGGC GGGTGGGTTC TGCACCACCC TCCCACCCTC CTTCCTCCGT GTGGACGATA GAGCCACATC CAGCACCACG 000160 000161 GACAGCTCCC GGGCGatccc atgggagtag aagaggtgtg agcaggttgc ccagctggtt agcggaaatg ccaagatcca 000240 000241 ggctcctgaa tttcagcctg gccctttctA TCTGTCTGAT ACCTCCTTTA CGAGTCTCTC TGCCTGCGTT GTGTGGAGCG 000320 000321 GGCCTGCTGC TGGTTGGGGG AGTTTGCAGG TTGCCCCTAT GCAAAAAAGG ACAGGATGCA TGACTGGCAT GTAAGGTGTT 000400 000401 CAGGAAAACC AGGAAAAGAC CAAAAAGAAG AATGTACTTC ATCTGGTTGG GCTGGATTCC CTCTGATAAG CCTTCCCAGT 000480 000481 TGACTGAAAG ATGAGGCTAG GCTCTAGCAA GTTGAAGTCA AACCAGCTCC TTCAAGAAGC TTTGAGCAGA ATGAAGTGGG 000560 000561 GAGGACCCAG CTTCCAGCCC AGGAAGCCCA CTGTACCTGG AGCCATCTGG GATAAGACTT TGACCCATGA CTCCCATATC 000640 000641 CACAGCCTGT CCATCCTAGC CCATCCCAGT TTATCCTGTA TCATTTGAGC TGGGATTCCC ACATCCTCTG AGTTGGAAGT 000720 000721 CCCATCTCAA GTCTTCAATA AAGACTCTTG AATATTGAAT CACA |
Predicted Small Protein
Name | NONHSAT006852_smProtein_227:382 |
Length | 52 |
Molecular weight | 5345.5736 |
Aromaticity | 0.0196078431373 |
Instability index | 49.6823529412 |
Isoelectric point | 9.69134521484 |
Runs | 9 |
Runs residual | 0.0222286934576 |
Runs probability | 0.0527978959352 |
Amino acid sequence | MPRSRLLNFSLALSICLIPPLRVSLPALCGAGLLLVGGVCRLPLCKKGQDA |
Secondary structure | LLLLLLLLHHHHHHHLLLLLLLLLLHHHHHLLLEEELLEEELLLLLLLLLL |
PRMN | LLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLL |
PiMo | oooooooooooooooTTTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiii |