NONHSAT006856
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT006856 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
726 nt |
Genomic location |
chr1-:156374051..156391544 |
Exon number |
4 |
Exons |
156374051..156374393,156383205..156383289,156384446..156384545,156391347..156391544 |
Genome context |
|
Sequence |
000001 GGCAGAGGAG GGAGCTAGGA GGTGAGACCC GCTCCACCCT GCTCGCCTAG GCTCGGCGGA GGCTAAGAGC AGGGCAGCCT 000080
000081 CCTCTGCCCG GCGCCCGCTG AGCCCCGGCA TCTGGAACTC AGGGCCCTGG CGCTCCAGGG GCGGGAACTG GCCGGGAGGA 000160 000161 CCGCGCGGGA GAGCACGGAT GGGCACCCTG GGCTCGATCT TCTCACCTGG GGCGGGTGGG TTCTGCACCA CCCTCCCACC 000240 000241 CTCCTTCCTC CGTGTGGACG ATAGAGCCAC ATCCAGCACC ACGGACAGCT CCCGGGCGCA CTGGAAGCTG AGGGTTTTGA 000320 000321 CAGCGGCAGG CCACATAGGC AAGGAAGCTG GTGCATGCAG TGTCTCTGGG CAAGGTTATG CAAACCAAAA AGAAGAATGT 000400 000401 ACTTCATCTG GTTGGGCTGG ATTCCCTCTG ATAAGCCTTC CCAGTTGACT GAAAGATGAG GCTAGGCTCT AGCAAGTTGA 000480 000481 AGTCAAACCA GCTCCTTCAA GAAGCTTTGA GCAGAATGAA GTGGGGAGGA CCCAGCTTCC AGCCCAGGAA GCCCACTGTA 000560 000561 CCTGGAGCCA TCTGGGATAA GACTTTGACC CATGACTCCC ATATCCACAG CCTGTCCATC CTAGCCCATC CCAGTTTATC 000640 000641 CTGTATCATT TGAGCTGGGA TTCCCACATC CTCTGAGTTG GAAGTCCCAT CTCAAGTCTT CAATAAAGAC TCTTGAATAT 000720 000721 TGAATC |
Predicted Small Protein
Name | NONHSAT006856_smProtein_455:652 |
Length | 66 |
Molecular weight | 7203.3356 |
Aromaticity | 0.0461538461538 |
Instability index | 43.8923076923 |
Isoelectric point | 10.182434082 |
Runs | 9 |
Runs residual | 0.0118269230769 |
Runs probability | 0.0484896661367 |
Amino acid sequence | MRLGSSKLKSNQLLQEALSRMKWGGPSFQPRKPTVPGAIWDKTLTHDSHIHSLSILAHPS LSCII |
Secondary structure | LLLLLLLLLHHHHHHHHHHHHHHLLLLLLLLLLLLLLLEELLLLLLLLLLLLLEEEELLL LLEEL |
PRMN | - |
PiMo | - |