NONHSAT007099
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT007099 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(AS) |
Length |
1711 nt |
Genomic location |
chr1+:161053627..161057335 |
Exon number |
3 |
Exons |
161053627..161054602,161054727..161054818,161056693..161057335 |
Genome context |
|
Sequence |
000001 GGGCTGGCTG GCTCTTCCCC ACCCTATGCC TGGGTCTCAA CTTTCCTTCC TATGTGAGCC TGGCCTCTGA TCTCAGGAGG 000080
000081 GGAAACTGAG GCTGGCACTT GCTGACACCC AGCCATCAAG AGCATCTTTA AGGAAGTATC TTTTCTTTAT GAGGGGCCTT 000160 000161 TCTCCATCAG TATCCCCTGC TGGGACTTAC AGATGTGAAT GTAGGGGATC GTAGAGGTGG GTCTGTGAGA AGGAGGAAGG 000240 000241 GAGTAAGTAT GAGTTTTTTG TGTATGGGGA GCTGTGGCTG AGGGCCTGGC CAATCTTAGT GCTGGTTCAA ACGCATGTGA 000320 000321 GGCTATCTTC TTGCATAAAC TGGTGGGTGT TTGGCACATA TATGTGTTCA TGTCTTATCT TAGGGGCATA TACGTACTTA 000400 000401 CTTGTCTGTG TCCAGAGGGA AGAGCTGTGT ATCAGTATGT GTGAATGTGT GTGCACACAT GATTCCGTGT GCATGTCACA 000480 000481 CCCTCTGTAT GCATGGAGTG CATTCTTGTC TCGCGGAACT CTGCACACAT AGTAAATATT TTGCTGTCGG TTTATCTTGG 000560 000561 CTTCCACATG TCTCTCTGTC TCAGCTGCCC TTGGTCTGTG GTATGTGGCT GTGAGCCTTT GCCTCTGCAT CCTGCCTGGA 000640 000641 ATGTCACCCC CAGCATCCTT CCCCACCTTA CCCCAAGACT TGAAGACATA TTAATCTCAG GCTCAAGGTG GAAGTACCCA 000720 000721 GAGATGAGGT CACTGTCCCT CCAGGTGATG GGAACTTGCC ATTAAGGACT CCCCAGCAGA ACAAAACAAA TGTTCCCTCT 000800 000801 CCCCTTGCTC CTCAGGTTCC TACTAAAAGG ACTGCCAACC TTCTCACCAC TACCCCCAGC CACTCCCCTG GGCCCCTCAG 000880 000881 CAGCTCTGGC CCCCCAAGGA GGCCTCTCCC TGGGAATCTC TGTCAGGGCT CTGCTGCTGC CACCACCAGA AAAACCAGCT 000960 000961 CTGGCTCCAG GCCTGGCAAC AATCTCCACC GAGAGCTGGA GTATGTGGGT GAGTCTGGGG TGAGAAAGGA CCTAGGAGGG 001040 001041 ACGCACCGAA GCTCACCATC CAGGACAGCC AGACCCAGTG ACCCTTCCAA CACCCCAGCA CCCCACTTCA GCCAGGCCTG 001120 001121 GACCATCACA GAGTCATCGT ATTTCAGAGC TGGAAGGTCA ATAGAGATCA TCTGGTCCTA GCTCTCGGTC TACTGAAGTC 001200 001201 TGGTTTCATC GCTGCCCAAG GTTACCAAAT AGATTAATAG CAGAAACGGG ATCTGGACCA AGACTCCTGA CTTCCCAGTC 001280 001281 CAAGGATTTT TTCAGAGACA TGAAACATTC CAGGTTCCTG GGAGCCATTA AGGAGAGTCT ACACACAGAA GAGCCAGAAT 001360 001361 GGGGGTGGTA GTGGAGGTAG GACCATCTGA TCCTCAGGCT AGGAGCCTCC AGCCCCCAGA GCAACCTCAG CTCTGTGCAG 001440 001441 GTTGTAGCTG CTGCAGCAGC AGCAGAGTGG CCTCCTACCA GGTGCCAGCT TCCTGGGGCA ATCTGGAGCC AGGCTTCCTC 001520 001521 CCTTACTGCC AGGCATTGCA TGAGGTCTAA CTAGAAGGGG GTCTCCTGTC CCCTTCCCTG GGCTTCTCTT AGTAAGAACA 001600 001601 GTTTTGCCAT CATGGAAAAG AAAGGCAAGA ACCATGTGAT GCAGTCACCA TTGCATCTCC AGCATCTAGT ATCCAGGTTG 001680 001681 TACCCAGTGT GCACTCAAAT GTACTATTCT T |
Predicted Small Protein
Name | NONHSAT007099_smProtein_1358:1549 |
Length | 64 |
Molecular weight | 6662.4788 |
Aromaticity | 0.0634920634921 |
Instability index | 65.9888888889 |
Isoelectric point | 4.57110595703 |
Runs | 11 |
Runs residual | 0.0296404275996 |
Runs probability | 0.0401470989706 |
Amino acid sequence | MGVVVEVGPSDPQARSLQPPEQPQLCAGCSCCSSSRVASYQVPASWGNLEPGFLPYCQAL HEV |
Secondary structure | LLEEEEELLLLLLLLLLLLLLLLLEEELEEEELLLLEEEEEELLLLLLLLLLLLHHHHHH HLL |
PRMN | - |
PiMo | - |