NONHSAT007131
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT007131 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1193 nt |
Genomic location |
chr1+:161139074..161140971 |
Exon number |
5 |
Exons |
161139074..161139814,161140199..161140309,161140410..161140559,161140697..161140739,161140824..161140971 |
Genome context |
|
Sequence |
000001 TTTTGTGCCT TAGAAGCTAC TTAGACATGG GCTACCCCAG AATCCTAGGC CCTATTTGTG AACCTTCCTC AAAGAGCCTA 000080
000081 TGCAAGTCTG TGGATAGAAG TAGTACTTAT AAGTGGCTTA GAGATAGGGG AAAGAACCCA GCTTCACTGA ACATTTCAGA 000160 000161 ACAGCCACAC TGGCCTGTCT GGTCCACTTC CTGGAGTACA CAGAGGAATG ATTTTTTGTG AAGTCTACAT AGTCACCCAA 000240 000241 TCTCTTCATC CTGGGTCAGT ACACAGTCTC CCCGGCCACA TGGGTGCCTG GGAAACTGAG AGTGAGGCAC CAGAAGTCTC 000320 000321 TTTTCACTCA TCAAATTCTC ATTTTCTGGG TCTCTCAAAT GTTTTCATGC TCTCAGGTAT CTCTAAGGGA CAGCAGTCTG 000400 000401 GAGGCTGACC ACGTTATTAG TGCCATTCCA GCTTCAGGTA ATGGAATAGC CACCTTCCCC TTCCCCAACC CCTACCAGTG 000480 000481 AGAAGCAAAA GCTATACCTT CCTGGGTCAG CAGGACCACA CCATGCCCCT GAACTGGTCA TCTCTATGGG AGTCTAATCC 000560 000561 CAAAGAGGAC TGACAACTGT AATGGGAATG CCTTCTGAGT CAGGCCTCTG CCTGATCTCT AGTGCTCAGT GAGCTGCTCC 000640 000641 CTGCTGAGGC TGCCCCTCTG GCTCGTGCCC TGAGTGCCAT CACTGCAGTG TCTGTAGCTG TGGTGAATCT GCAGTACCAA 000720 000721 GGAGCCCATC TGCCTGTCCA GGGATTTGGA CATTTGGTGC CATCTTCAGA AGATCCAGGA GTCCTGGGAA TCGTGTATGA 000800 000801 CTCAGTTGCT TTCCCTGAGC AGGACGGGAG CCCCCCTGGC CTCAGAGTGA CTGTGATGCT GGGAGGTTCC TGGTTACAGA 000880 000881 CACTGGAGGC TAGTGGCTGT GTCTTATCTC AGGAGCTGTT TCAACAGCGG GCCCAGGAAG CAGCTGCTAC ACAATTAGGA 000960 000961 CTGAAGGAGA TGCCGAGCCA CTGCTTGGTC CATCTACACA AGAACTGCAT TCCCCAGTAT ACACTAGGTC ACTGGCAAAA 001040 001041 ACTAGAGTCA GCTAGGCAAT TCCTGACTGC TCACAGGTTG CCCCTGACTC TGGCTGGAGC CTCCTATGAG GGAGTTGCTG 001120 001121 TTAATGACTG TATAGAGAGT GGGCGCCAGG CAGCAGTCAG TGTCCTGGGC ACAGAACCTA ACAGCTGATC CCC |
Predicted Small Protein
Name | NONHSAT007131_smProtein_26:220 |
Length | 65 |
Molecular weight | 7396.2781 |
Aromaticity | 0.109375 |
Instability index | 49.34375 |
Isoelectric point | 9.50787353516 |
Runs | 9 |
Runs residual | 0.00796875 |
Runs probability | 0.0477340085183 |
Amino acid sequence | MGYPRILGPICEPSSKSLCKSVDRSSTYKWLRDRGKNPASLNISEQPHWPVWSTSWSTQR NDFL |
Secondary structure | LLLLLLLLLLLLLLLLHHHHLLLLLLLHHHHHHLLLLLLEEELLLLLLLLEELLLLLLLL LLLL |
PRMN | - |
PiMo | - |