NONHSAT007200
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT007200 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
527 nt |
Genomic location |
chr1+:161677029..161681262 |
Exon number |
4 |
Exons |
161677029..161677133,161680230..161680282,161680550..161680653,161680998..161681262 |
Genome context |
|
Sequence |
000001 TTGCAGGAGA CCTAAACACA GTCACCATGA AGCTGGGCTG TGTCCTCATG GCCTGGGCCC TCTACCTTTC CCTTGGTGTG 000080
000081 CTCTGGGTGG CCCAGATGCT ACTGGTTACC ATTGTCTTTG CTCCTGGTTT CCCGTACCAG CAGCTGGATG TCATGCCGCT 000160 000161 GCCAGTTTTG AGACGCTGCA GTGTGAGGGA CCTGTCTGCA CTGAGGAGAG CAGCTGCCAC ACGGAGGATG ACTTGACTGA 000240 000241 TGCAAGGGAA GCTGGCTTCC AGACTGGCTG ATCCTCCAAG GTCCAGCCAA GCCAGTTTTT GAAGGGGACC TGCTGGTTCT 000320 000321 GCGCTGCCAG GCCTGGCAAG ACTGGCCACT GACTCAGGTG ACCTTCTACC GAGATGGCTC AGCTCTGGGT CCCCCCGGGC 000400 000401 CTAACAGGGA ATTCTCCATC ACCGTGGTAC AAAAGGCAGA CAGCGGGCAC TACCACTGCA GTGGCATCTT CCAGAGCCCT 000480 000481 GGTCCTGGGA TCCCAGAAAC AGCATCTGTT GTGGCTATCA CAGTCCA |
Predicted Small Protein
Name | NONHSAT007200_smProtein_26:235 |
Length | 70 |
Molecular weight | 7779.4654 |
Aromaticity | 0.0869565217391 |
Instability index | 57.2768115942 |
Isoelectric point | 10.8147583008 |
Runs | 8 |
Runs residual | 0.0233892954513 |
Runs probability | 0.0190006182653 |
Amino acid sequence | MKLGCVLMAWALYLSLGVLWVAQMLLVTIVFAPGFPYQQLDVMPLPVLRRCSVRDLSALR RAAATRRMT |
Secondary structure | LLHHHHHHHHHHHHHHLHHHHHHHHHHHHEELLLLLLLLLLLLLLLLLLLLLLHHHHHHH HHHHHHLLL |
PRMN | LLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL LLLLLLLLL |
PiMo | oooooooooooTTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiiiiiiiiiiiiiii iiiiiiiii |